RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 HMGCS2P54868 508 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 PPP2R5CQ13362 524 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 ORC1Q13415 861 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 FAM151AQ8WW52 585 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 CD248Q9HCU0 757 aa14.56□□□□□ -0.08
PTPN1-202ENST00000541713 SHOX2O60902 331 aaPredicted RBP14.55□□□□□ -0.08
PTPN1-202ENST00000541713 CHN1P15882 459 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 NPTX2P47972 431 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 PPP2R2AP63151 447 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 CUL1Q13616 776 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 TMEM132AQ24JP5 1023 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 C10orf76Q5T2E6 689 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 MOXD1Q6UVY6 613 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 SCARA5Q6ZMJ2 495 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 RNF207Q6ZRF8 634 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 GSTA5Q7RTV2 222 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 ZNF572Q7Z3I7 529 aaPredicted RBP14.55□□□□□ -0.08
PTPN1-202ENST00000541713 NLRX1Q86UT6 975 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 EFCAB13Q8IY85 973 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 SYTL5Q8TDW5 730 aaPredicted RBP14.55□□□□□ -0.08
PTPN1-202ENST00000541713 PRMT1Q99873 361 aaKnown RBP14.55□□□□□ -0.08
PTPN1-202ENST00000541713 LBHD1Q9BQE6 289 aaPredicted RBP14.55□□□□□ -0.08
PTPN1-202ENST00000541713 RPAP3Q9H6T3 665 aaPredicted RBP14.55□□□□□ -0.08
PTPN1-202ENST00000541713 FRMPD4Q14CM0 1322 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 CSDE1O75534 798 aaKnown RBP14.55□□□□□ -0.08
PTPN1-202ENST00000541713 RARAP10276 462 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 ADSSP30520 456 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 PLCB3Q01970 1234 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 KDM7AQ6ZMT4 941 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 C9orf72Q96LT7 481 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 CHST7Q9NS84 486 aa14.55□□□□□ -0.08
PTPN1-202ENST00000541713 GMNCA6NCL1 334 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 HMGB1P1B2RPK0 211 aaPredicted RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 GOLGA8SH3BPF8 625 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 GOLGA8MH3BSY2 632 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 CCDC172P0C7W6 258 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 ATF7P17544 494 aaPredicted RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 CXCL9Q07325 125 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 KYNUQ16719 465 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 SGO2Q562F6 1265 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 ZBTB41Q5SVQ8 909 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 INTS8Q75QN2 995 aaKnown RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 EPS8L1Q8TE68 723 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 TMEM59LQ9UK28 342 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 STXBP5LQ9Y2K9 1186 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 CDK5RAP2Q96SN8 1893 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 IFNB1P01574 187 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 RRM1P23921 792 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 MAPK4P31152 587 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 PDE6CP51160 858 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 DYNLT1P63172 113 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 DMP1Q13316 513 aaPredicted RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 NBPF12Q5TAG4 269 aaPredicted RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 RUFY4Q6ZNE9 571 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 HERC5Q9UII4 1024 aaKnown RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 CCDC188H7C350 402 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 PIK3R2O00459 728 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 KRT10P13645 584 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 PLS3P13797 630 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 SV2AQ7L0J3 742 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 NIM1KQ8IY84 436 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 MSL3Q8N5Y2 521 aaKnown RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 TTLL6Q8N841 843 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 PRPF38AQ8NAV1 312 aaKnown RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 ATP8B4Q8TF62 1192 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 FNBP1Q96RU3 617 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 PSMD1Q99460 953 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 JPH2Q9BR39 696 aaPredicted RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 RAB17Q9H0T7 212 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 DDX20Q9UHI6 824 aaKnown RBP14.54□□□□□ -0.08
PTPN1-202ENST00000541713 SCN9AQ15858 1988 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 SPATA31A6Q5VVP1 1343 aa14.54□□□□□ -0.08
PTPN1-202ENST00000541713 EIF3DO15371 548 aaKnown RBP eCLIP14.53□□□□□ -0.08
PTPN1-202ENST00000541713 RPS6KA5O75582 802 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 CHRNB2P17787 502 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 ADCY8P40145 1251 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 SMTNP53814 917 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 BMT2Q1RMZ1 405 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 C1orf220Q5T0J3 134 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 SNRNP48Q6IEG0 339 aaKnown RBP14.53□□□□□ -0.08
PTPN1-202ENST00000541713 NEK9Q8TD19 979 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 TBC1D31Q96DN5 1066 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 AGO4Q9HCK5 861 aaKnown RBP14.53□□□□□ -0.08
PTPN1-202ENST00000541713 HAUS2Q9NVX0 235 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 EIF4E1BA6NMX2 242 aaKnown RBP14.53□□□□□ -0.08
PTPN1-202ENST00000541713 MEFVO15553 781 aaPredicted RBP14.53□□□□□ -0.08
PTPN1-202ENST00000541713 CYP11B1P15538 503 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 WNT7BP56706 349 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 FSTL1Q12841 308 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 CALCOCO2Q13137 446 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 TMEM270Q6UE05 265 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 ANO5Q75V66 913 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 PNMA8AQ86V59 439 aaPredicted RBP14.53□□□□□ -0.08
PTPN1-202ENST00000541713 NT5C1BQ96P26 610 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 RNF146Q9NTX7 359 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 ASNSP08243 561 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 HNRNPH1P31943 449 aaKnown RBP14.53□□□□□ -0.08
PTPN1-202ENST00000541713 LMO3Q8TAP4 145 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 HERPUD2Q9BSE4 406 aa14.53□□□□□ -0.08
PTPN1-202ENST00000541713 RANBP17Q9H2T7 1088 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms