RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 SYDE2Q5VT97 1194 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 C19orf18Q8NEA5 215 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 CCT7Q99832 543 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 NUP85Q9BW27 656 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 SRP72O76094 671 aaKnown RBP16.2■□□□□ 0.18
HMGA2-210ENST00000541363 SLC39A14Q15043 492 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 MDH1BQ5I0G3 518 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 CATSPER4Q7RTX7 472 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 STON1Q9Y6Q2 735 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 SEMA3EO15041 775 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 STRNO43815 780 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 RALAP11233 206 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 TBXAS1P24557 533 aaPredicted RBP16.2■□□□□ 0.18
HMGA2-210ENST00000541363 KDSRQ06136 332 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 G2E3Q7L622 706 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 ZBED8Q8IZ13 594 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 SNX31Q8N9S9 440 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 APOL1O14791 398 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 ALDH6A1Q02252 535 aaKnown RBP16.2■□□□□ 0.18
HMGA2-210ENST00000541363 PLOD1Q02809 727 aaPredicted RBP16.2■□□□□ 0.18
HMGA2-210ENST00000541363 INAQ16352 499 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 CDYLQ9Y232 598 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 IFT140Q96RY7 1462 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 GGPS1O95749 300 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 MYBL1P10243 752 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 MICU2Q8IYU8 434 aa16.2■□□□□ 0.18
HMGA2-210ENST00000541363 PDZK1P1A8MUH7 402 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 LAMB3Q13751 1172 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 C10orf53Q8N6V4 93 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 ATXN7L3BQ96GX2 97 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 MAN1C1Q9NR34 630 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 PNMA6AP0CW24 399 aaPredicted RBP16.19■□□□□ 0.18
HMGA2-210ENST00000541363 TMEM154Q6P9G4 183 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 WNT8AQ9H1J5 351 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 POLR3EQ9NVU0 708 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 RC3H1Q5TC82 1133 aaKnown RBP16.19■□□□□ 0.18
HMGA2-210ENST00000541363 FAM45BPQ6NSW5 357 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 CCDC81Q6ZN84 652 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 GPT2Q8TD30 523 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 TJP2Q9UDY2 1190 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 GRID2IPA4D2P6 1211 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 STAG2Q8N3U4 1231 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 CLEC4MQ9H2X3 399 aaPredicted RBP16.19■□□□□ 0.18
HMGA2-210ENST00000541363 SETD1BQ9UPS6 1966 aaKnown RBP16.19■□□□□ 0.18
HMGA2-210ENST00000541363 CLDN3O15551 220 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 ENO3P13929 434 aaPredicted RBP16.19■□□□□ 0.18
HMGA2-210ENST00000541363 COX10Q12887 443 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 EYA1Q99502 592 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 CAPN1P07384 714 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 PLCG1P19174 1290 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 PDIA3P30101 505 aaKnown RBP16.19■□□□□ 0.18
HMGA2-210ENST00000541363 SDC4P31431 198 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 KCNQ4P56696 695 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 BATF3Q9NR55 127 aa16.19■□□□□ 0.18
HMGA2-210ENST00000541363 DYTNA2CJ06 578 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 DTNBO60941 627 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 COPB2P35606 906 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 TAP1Q03518 808 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 VSTM4Q8IW00 320 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 OLFM1Q99784 485 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 SPATA2Q9UM82 520 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 FGAP02671 866 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 SERPINB3P29508 390 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 STX3Q13277 289 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 TRIM25Q14258 630 aaKnown RBP16.18■□□□□ 0.18
HMGA2-210ENST00000541363 NCF4Q15080 339 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 KIZQ2M2Z5 673 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 TERB1Q8NA31 727 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 MRPL39Q9NYK5 338 aaKnown RBP16.18■□□□□ 0.18
HMGA2-210ENST00000541363 HSPBP1Q9NZL4 362 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 CYP19A1P11511 503 aaPredicted RBP16.18■□□□□ 0.18
HMGA2-210ENST00000541363 COBLL1Q53SF7 1204 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 CARD9Q9H257 536 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 PKP3Q9Y446 797 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 PEX3P56589 373 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 ZCWPW1Q9H0M4 648 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 MYLK2Q9H1R3 596 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 PIGUQ9H490 435 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 GYG1P46976 350 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 DPCR1Q3MIW9 517 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 FLAD1Q8NFF5 587 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 SYCP2Q9BX26 1530 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 JAK3P52333 1124 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 LRRC36Q1X8D7 754 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 PGBD4Q96DM1 585 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 OMA1Q96E52 524 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 KCNK16Q96T55 309 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 TSEN34Q9BSV6 310 aaKnown RBP16.18■□□□□ 0.18
HMGA2-210ENST00000541363 CEP72Q9P209 647 aa16.18■□□□□ 0.18
HMGA2-210ENST00000541363 GCP02774 474 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 BMP3P12645 472 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 ATXN3P54252 364 aaPredicted RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 LONP2Q86WA8 852 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 LRRC49Q8IUZ0 686 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 GALNT4Q8N4A0 578 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 DDHD1Q8NEL9 900 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 PNMA3Q9UL41 463 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms