RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 SYT11Q9BT88 431 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 RAB17Q9H0T7 212 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 GOLGA6L7A0A1B0GV03 622 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 FZD9O00144 591 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 TNFAIP3P21580 790 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 TMEM132BQ14DG7 1078 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 NLRX1Q86UT6 975 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 ALG3Q92685 438 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 ERP44Q9BS26 406 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 TXLNGYQ9BZA5 131 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 DAAM1Q9Y4D1 1078 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 EMSYQ7Z589 1322 aa13.48□□□□□ -0.25
RNF4-222ENST00000541204 WDR64B1ANS9 1081 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 KRT13P13646 458 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 PLTPP55058 493 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 PSMC5P62195 406 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 BYSLQ13895 437 aaKnown RBP13.47□□□□□ -0.25
RNF4-222ENST00000541204 DUPD1Q68J44 220 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 NIPA1Q7RTP0 329 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 CCDC127Q96BQ5 260 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 CARD9Q9H257 536 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 ZDHHC18Q9NUE0 388 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 GABBR1Q9UBS5 961 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 APEX2Q9UBZ4 518 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 PNMA2Q9UL42 364 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 PCNTO95613 3336 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 DNM1LO00429 736 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 PAEPP09466 180 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 PPP3CAQ08209 521 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 PHLDB3Q6NSJ2 640 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 ANO5Q75V66 913 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 CPLX4Q7Z7G2 160 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 C3orf20Q8ND61 904 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 ACCSQ96QU6 501 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 MKNK1Q9BUB5 465 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 STRA6Q9BX79 667 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 EPB41L4BQ9H329 900 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 KLC4Q9NSK0 619 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 SNX24Q9Y343 169 aa13.47□□□□□ -0.25
RNF4-222ENST00000541204 RBBP6Q7Z6E9 1792 aaKnown RBP13.47□□□□□ -0.25
RNF4-222ENST00000541204 GOLGA6L10A0A0M3HER8 536 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 SMTNP53814 917 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 SWSAP1Q6NVH7 229 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 CACNA2D3Q8IZS8 1091 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 TATDN2Q93075 761 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 TLCD1Q96CP7 247 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 C18orf8Q96DM3 657 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 FAM84AQ96KN4 292 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 CEP170P1Q96L14 293 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 CCDC114Q96M63 670 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 YY1AP1Q9H869 796 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 AS3MTQ9HBK9 375 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 CD248Q9HCU0 757 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 SLC40A1Q9NP59 571 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 HSPBP1Q9NZL4 362 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 DBR1Q9UK59 544 aaKnown RBP13.46□□□□□ -0.25
RNF4-222ENST00000541204 USP20Q9Y2K6 914 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 DIS3Q9Y2L1 958 aaKnown RBP13.46□□□□□ -0.25
RNF4-222ENST00000541204 FER1L6Q2WGJ9 1857 aa13.46□□□□□ -0.25
RNF4-222ENST00000541204 C5orf60A6NFR6 353 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 SMIM23A6NLE4 172 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 FOXN3O00409 490 aaPredicted RBP13.46□□□□□ -0.26
RNF4-222ENST00000541204 ATP2C2O75185 946 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 RASSF9O75901 435 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 CCND2P30279 289 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 EIF3BP55884 814 aaKnown RBP13.46□□□□□ -0.26
RNF4-222ENST00000541204 DRP2Q13474 957 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 PLCB4Q15147 1175 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 VSIG10LQ86VR7 867 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 JAMLQ86YT9 394 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 FBXO25Q8TCJ0 367 aa13.46□□□□□ -0.26
RNF4-222ENST00000541204 POP1Q99575 1024 aaKnown RBP13.46□□□□□ -0.26
RNF4-222ENST00000541204 UBE2TQ9NPD8 197 aaPredicted RBP13.46□□□□□ -0.26
RNF4-222ENST00000541204 CHORDC1Q9UHD1 332 aaPredicted RBP13.46□□□□□ -0.26
RNF4-222ENST00000541204 ZNF214Q9UL59 606 aaPredicted RBP13.46□□□□□ -0.26
RNF4-222ENST00000541204 UBE4BO95155 1302 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 TLDC2A0PJX2 215 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 ANKRD62A6NC57 917 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 RGS20O76081 388 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 VAMP7P51809 220 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 PMS2P54278 862 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 ANKRD20A8PQ5CZ79 823 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 SLC20A1Q8WUM9 679 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 NAP1L3Q99457 506 aaPredicted RBP13.45□□□□□ -0.26
RNF4-222ENST00000541204 JPH2Q9BR39 696 aaPredicted RBP13.45□□□□□ -0.26
RNF4-222ENST00000541204 ALG6Q9Y672 507 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 TMEM110-MUSTN1A8MSY1 372 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 ANKRD63C9JTQ0 380 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 MARCKSL1P49006 195 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 JAK3P52333 1124 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 HIRAP54198 1017 aaPredicted RBP13.45□□□□□ -0.26
RNF4-222ENST00000541204 KRT76Q01546 638 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 SF3A3Q12874 501 aaKnown RBP eCLIP13.45□□□□□ -0.26
RNF4-222ENST00000541204 NFIL3Q16649 462 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 UBAP2Q5T6F2 1119 aaKnown RBP13.45□□□□□ -0.26
RNF4-222ENST00000541204 GKAP1Q5VSY0 366 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms