RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 LRRC27Q9C0I9 530 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 TLR9Q9NR96 1032 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 PARP2Q9UGN5 583 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 PLXNA4Q9HCM2 1894 aa14.71□□□□□ -0.05
CCDC130-202ENST00000540216 A0A087X0B3 334 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 FSD2A1L4K1 749 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 K7ENM7 598 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 TRAK2O60296 914 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 TOM1L1O75674 476 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 POMCP01189 267 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 MCF2P10911 925 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 GAP43P17677 238 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 DNAJB1P25685 340 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 PBX3P40426 434 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 GRIK3Q13003 919 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 ZNF568Q3ZCX4 644 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 TCEAL5Q5H9L2 206 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 SHC4Q6S5L8 630 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 HAUS6Q7Z4H7 955 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 FAM178BQ8IXR5 827 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 IQUBQ8NA54 791 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 DDX12PQ92771 950 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 ZFP42Q96MM3 310 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 PYM1Q9BRP8 204 aaKnown RBP14.7□□□□□ -0.06
CCDC130-202ENST00000540216 TARS2Q9BW92 718 aaKnown RBP14.7□□□□□ -0.06
CCDC130-202ENST00000540216 MAGEF1Q9HAY2 307 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 PTPRHQ9HD43 1115 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 FAM13BQ9NYF5 915 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 SEL1LQ9UBV2 794 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 PCDHA7Q9UN72 937 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 USP20Q9Y2K6 914 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 ATG2AQ2TAZ0 1938 aa14.7□□□□□ -0.06
CCDC130-202ENST00000540216 FSCN2O14926 492 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 NR1I2O75469 434 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 RECQL4O94761 1208 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 GALTP07902 379 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 PROZP22891 400 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 AKAP5P24588 427 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 SLC11A1P49279 550 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 SCNN1GP51170 649 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 AFF1P51825 1210 aaKnown RBP14.69□□□□□ -0.06
CCDC130-202ENST00000540216 NUCB2P80303 420 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 MRPS5P82675 430 aaKnown RBP14.69□□□□□ -0.06
CCDC130-202ENST00000540216 DSC1Q08554 894 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 BMS1Q14692 1282 aaKnown RBP14.69□□□□□ -0.06
CCDC130-202ENST00000540216 COL19A1Q14993 1142 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 E2F4Q16254 413 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 MPZL3Q6UWV2 235 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 ZNF280BQ86YH2 543 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 PDILTQ8N807 584 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 IGSF21Q96ID5 467 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 CCDC94Q9BW85 323 aaPredicted RBP14.69□□□□□ -0.06
CCDC130-202ENST00000540216 SCAND2PQ9GZW5 306 aaPredicted RBP14.69□□□□□ -0.06
CCDC130-202ENST00000540216 GBP3Q9H0R5 595 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 CDT1Q9H211 546 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 TNMDQ9H2S6 317 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 ST6GALNAC4Q9H4F1 302 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 ZHX3Q9H4I2 956 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 NGRNQ9NPE2 291 aaKnown RBP14.69□□□□□ -0.06
CCDC130-202ENST00000540216 PRDM6Q9NQX0 595 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 TOPORSQ9NS56 1045 aaPredicted RBP14.69□□□□□ -0.06
CCDC130-202ENST00000540216 DNAJB4Q9UDY4 337 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 MYO7AQ13402 2215 aa14.69□□□□□ -0.06
CCDC130-202ENST00000540216 TDRD15B5MCY1 1934 aaKnown RBP14.68□□□□□ -0.06
CCDC130-202ENST00000540216 MYMKA6NI61 221 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 DDHD2O94830 711 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 PIGRP01833 764 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 ALDH2P05091 517 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 GRM5P41594 1212 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 YARSP54577 528 aaKnown RBP14.68□□□□□ -0.06
CCDC130-202ENST00000540216 AMPD3Q01432 767 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 RESP18Q5W5W9 173 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 DYMQ7RTS9 669 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 DDX53Q86TM3 631 aaKnown RBP14.68□□□□□ -0.06
CCDC130-202ENST00000540216 COLGALT2Q8IYK4 626 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 GSTCDQ8NEC7 633 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 MICAL1Q8TDZ2 1067 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 LEO1Q8WVC0 666 aaPredicted RBP14.68□□□□□ -0.06
CCDC130-202ENST00000540216 HVCN1Q96D96 273 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 PABPC5Q96DU9 382 aaKnown RBP14.68□□□□□ -0.06
CCDC130-202ENST00000540216 BICD1Q96G01 975 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 SPATA32Q96LK8 384 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 FIZ1Q96SL8 496 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 CDCA3Q99618 268 aaPredicted RBP14.68□□□□□ -0.06
CCDC130-202ENST00000540216 TCHPQ9BT92 498 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 PANK2Q9BZ23 570 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 UBE2ZQ9H832 354 aaPredicted RBP14.68□□□□□ -0.06
CCDC130-202ENST00000540216 ENTPD7Q9NQZ7 604 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 SNTG2Q9NY99 539 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 TBX20Q9UMR3 447 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 FAN1Q9Y2M0 1017 aa14.68□□□□□ -0.06
CCDC130-202ENST00000540216 BRWD1Q9NSI6 2320 aa14.67□□□□□ -0.06
CCDC130-202ENST00000540216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.67□□□□□ -0.06
CCDC130-202ENST00000540216 ABLIM1O14639 778 aa14.67□□□□□ -0.06
CCDC130-202ENST00000540216 HNRNPDLO14979 420 aaKnown RBP14.67□□□□□ -0.06
CCDC130-202ENST00000540216 B4GALT3O60512 393 aa14.67□□□□□ -0.06
CCDC130-202ENST00000540216 IRS1P35568 1242 aa14.67□□□□□ -0.06
CCDC130-202ENST00000540216 LIG4P49917 911 aa14.67□□□□□ -0.06
CCDC130-202ENST00000540216 GTF2BQ00403 316 aa14.67□□□□□ -0.06
CCDC130-202ENST00000540216 NOLC1Q14978 699 aaKnown RBP eCLIP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms