RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 NLRP4Q96MN2 994 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 C16orf70Q9BSU1 422 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 ZCCHC17Q9NP64 241 aaKnown RBP24.32■■□□□ 1.48
HOMER3-204ENST00000539827 FLRT1Q9NZU1 646 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 DAAM1Q9Y4D1 1078 aa24.32■■□□□ 1.48
HOMER3-204ENST00000539827 FOXN3O00409 490 aaPredicted RBP24.31■■□□□ 1.48
HOMER3-204ENST00000539827 ENC1O14682 589 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 PRKCBP05771 671 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 C17orf99Q6UX52 265 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 USP37Q86T82 979 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 TAS1R2Q8TE23 839 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 PACSIN1Q9BY11 444 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 SALL4Q9UJQ4 1053 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 ZNF236Q9UL36 1845 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 PASKQ96RG2 1323 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 A0A0B4J269 797 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 KIAA0391O15091 583 aaKnown RBP24.31■■□□□ 1.48
HOMER3-204ENST00000539827 MSCO60682 206 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 RFX1P22670 979 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 KLRC1P26715 233 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 GTF2H1P32780 548 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 PSMD6Q15008 389 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 SEZ6Q53EL9 994 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 SV2AQ7L0J3 742 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 ZBTB33Q86T24 672 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 DNAAF5Q86Y56 855 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 ZNF516Q92618 1163 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 ELMO3Q96BJ8 720 aa24.31■■□□□ 1.48
HOMER3-204ENST00000539827 PPFIA4O75335 1185 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 MMP3P08254 477 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 ZNF710Q8N1W2 664 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 TXLNBQ8N3L3 684 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 MRPL4Q9BYD3 311 aaKnown RBP24.3■■□□□ 1.48
HOMER3-204ENST00000539827 C2orf40Q9H1Z8 148 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 PDE11AQ9HCR9 933 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 LUC7LQ9NQ29 371 aaKnown RBP24.3■■□□□ 1.48
HOMER3-204ENST00000539827 CDC23Q9UJX2 597 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 COQ4Q9Y3A0 265 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 CAPN6Q9Y6Q1 641 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 EVPLQ92817 2033 aa24.3■■□□□ 1.48
HOMER3-204ENST00000539827 LDHAP00338 332 aaKnown RBP24.29■■□□□ 1.48
HOMER3-204ENST00000539827 ATP1A1P05023 1023 aaKnown RBP24.29■■□□□ 1.48
HOMER3-204ENST00000539827 TNFAIP2Q03169 654 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 TFDP1Q14186 410 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 FBXL13Q8NEE6 735 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 FNBP1Q96RU3 617 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 HDAC6Q9UBN7 1215 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 FAM155AB1AL88 458 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-204ENST00000539827 H3BRB1 525 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 DDX3XO00571 662 aaKnown RBP eCLIP24.29■■□□□ 1.48
HOMER3-204ENST00000539827 TACC1O75410 805 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 CYP2B6P20813 491 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 CCL14Q16627 93 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 MAPK6Q16659 721 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 ZPBP2Q6X784 338 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 MSL3Q8N5Y2 521 aaKnown RBP24.29■■□□□ 1.48
HOMER3-204ENST00000539827 MAP7D2Q96T17 732 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 ACO2Q99798 780 aaKnown RBP24.29■■□□□ 1.48
HOMER3-204ENST00000539827 TUT1Q9H6E5 874 aaKnown RBP24.29■■□□□ 1.48
HOMER3-204ENST00000539827 RAB20Q9NX57 234 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 RBAKQ9NYW8 714 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-204ENST00000539827 TLL2Q9Y6L7 1015 aa24.29■■□□□ 1.48
HOMER3-204ENST00000539827 CLDN3O15551 220 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 BUB1O43683 1085 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 TFRCP02786 760 aaKnown RBP24.28■■□□□ 1.48
HOMER3-204ENST00000539827 TNNI1P19237 187 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 GPC3P51654 580 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 ENPEPQ07075 957 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 VPS36Q86VN1 386 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 PPM1KQ8N3J5 372 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 LNX1Q8TBB1 728 aaPredicted RBP24.28■■□□□ 1.48
HOMER3-204ENST00000539827 PPP1R16BQ96T49 567 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 TCHPQ9BT92 498 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 ZFYVE28Q9HCC9 887 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 NAGPAQ9UK23 515 aa24.28■■□□□ 1.48
HOMER3-204ENST00000539827 DYNC1LI2O43237 492 aaPredicted RBP24.27■■□□□ 1.48
HOMER3-204ENST00000539827 AMPD2Q01433 879 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 NAB2Q15742 525 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 KIAA0753Q2KHM9 967 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 ALKBH5Q6P6C2 394 aaKnown RBP24.27■■□□□ 1.48
HOMER3-204ENST00000539827 OLIG1Q8TAK6 271 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 U2AF1L4Q8WU68 220 aaKnown RBP24.27■■□□□ 1.48
HOMER3-204ENST00000539827 KREMEN1Q96MU8 473 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 INO80B-WBP1J3KQ70 363 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 ASAP2O43150 1006 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 ANXA13P27216 316 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 CYP2C19P33261 490 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 USP8P40818 1118 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 NAP1L1P55209 391 aaKnown RBP24.27■■□□□ 1.48
HOMER3-204ENST00000539827 INHBEP58166 350 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 ELF2Q15723 593 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 ERCC6LQ2NKX8 1250 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 MTERF4Q7Z6M4 381 aaKnown RBP24.27■■□□□ 1.48
HOMER3-204ENST00000539827 TATDN2Q93075 761 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 NT5C1BQ96P26 610 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 ZIC5Q96T25 663 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 PI4K2AQ9BTU6 479 aa24.27■■□□□ 1.48
HOMER3-204ENST00000539827 INO80BQ9C086 356 aaPredicted RBP24.27■■□□□ 1.48
HOMER3-204ENST00000539827 ABT1Q9ULW3 272 aaKnown RBP24.27■■□□□ 1.48
HOMER3-204ENST00000539827 NENFQ9UMX5 172 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms