RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 EDEM3Q9BZQ6 932 aa15.46■□□□□ 0.07
CACNB1-206ENST00000539338 TMEM60Q9H2L4 133 aa15.46■□□□□ 0.07
CACNB1-206ENST00000539338 ZNF302Q9NR11 478 aa15.46■□□□□ 0.07
CACNB1-206ENST00000539338 SH2D3CQ8N5H7 860 aa15.46■□□□□ 0.06
CACNB1-206ENST00000539338 AGPAT1Q99943 283 aa15.46■□□□□ 0.06
CACNB1-206ENST00000539338 DAGLAQ9Y4D2 1042 aa15.46■□□□□ 0.06
CACNB1-206ENST00000539338 WDR46O15213 610 aaKnown RBP15.45■□□□□ 0.06
CACNB1-206ENST00000539338 MX2P20592 715 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 FGFR4P22455 802 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 GAS2L1Q99501 681 aaPredicted RBP15.45■□□□□ 0.06
CACNB1-206ENST00000539338 DCTN4Q9UJW0 460 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 MST1RQ04912 1400 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 SFNP31947 248 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 ZNF543Q08ER8 600 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 ART3Q13508 389 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 SLC18A3Q16572 532 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 TKFCQ3LXA3 575 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 RWDD4Q6NW29 188 aaKnown RBP15.45■□□□□ 0.06
CACNB1-206ENST00000539338 PCSK9Q8NBP7 692 aaKnown RBP15.45■□□□□ 0.06
CACNB1-206ENST00000539338 ZNF512BQ96KM6 892 aaPredicted RBP15.45■□□□□ 0.06
CACNB1-206ENST00000539338 WNT8AQ9H1J5 351 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 FAM187AA6NFU0 413 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 KRT14P02533 472 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 KITP10721 976 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 CAV1Q03135 178 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 TBC1D16Q8TBP0 767 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 POLIQ9UNA4 740 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 PI4K2BG5E9Z4 385 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 SUPT20HL2P0C7V6 817 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 SKIP12755 728 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 GPC3P51654 580 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 TFDP2Q14188 446 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 SBK1Q52WX2 424 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 DSTYKQ6XUX3 929 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 RHPN2Q8IUC4 686 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 ZBED8Q8IZ13 594 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 TTC13Q8NBP0 860 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 RIN2Q8WYP3 895 aaPredicted RBP15.45■□□□□ 0.06
CACNB1-206ENST00000539338 ASNSD1Q9NWL6 643 aa15.45■□□□□ 0.06
CACNB1-206ENST00000539338 STXBP3O00186 592 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 CTIFO43310 598 aaKnown RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 HSPA4LO95757 839 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 PSMC1P62191 440 aaKnown RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 PRPF38AQ8NAV1 312 aaKnown RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 REEP2Q9BRK0 252 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 SCOCQ9UIL1 159 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 CPSF3Q9UKF6 684 aaKnown RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 TFR2Q9UP52 801 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 SPECC1L-ADORA2AF8WAN1 911 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 M0QYV0 167 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 PDIA2Q13087 525 aaKnown RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 SMAD1Q15797 465 aaKnown RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 CEP55Q53EZ4 464 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 FBXL13Q8NEE6 735 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 ANKRD7Q92527 254 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 TGS1Q96RS0 853 aaKnown RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 ACAD9Q9H845 621 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 PTPRUQ92729 1446 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 CNTNAP5Q8WYK1 1306 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 GOLGA8CPA6NN73 597 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 GYG2O15488 501 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 BFSP2Q13515 415 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 NCAPHQ15003 741 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 EPHA7Q15375 998 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 ANKRD20A4Q4UJ75 823 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 ANKRD20A8PQ5CZ79 823 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 ANKRD20A2Q5SQ80 823 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 ANKRD20A1Q5TYW2 823 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 PPM1NQ8N819 430 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 EXT2Q93063 718 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 TRAIPQ9BWF2 469 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 RNF208Q9H0X6 261 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 FAF1Q9UNN5 650 aaPredicted RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 CCDC195A0A1B0GUA6 201 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 ZNF280CQ8ND82 737 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 SNF8Q96H20 258 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 DEFB129Q9H1M3 183 aa15.44■□□□□ 0.06
CACNB1-206ENST00000539338 NOP53Q9NZM5 478 aaKnown RBP15.44■□□□□ 0.06
CACNB1-206ENST00000539338 SPAG7O75391 227 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 CAMTA2O94983 1202 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 C6orf222P0C671 652 aaPredicted RBP15.43■□□□□ 0.06
CACNB1-206ENST00000539338 KPNA2P52292 529 aaKnown RBP15.43■□□□□ 0.06
CACNB1-206ENST00000539338 ACTN3Q08043 901 aaPredicted RBP15.43■□□□□ 0.06
CACNB1-206ENST00000539338 ARL13BQ3SXY8 428 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 RHOT1Q8IXI2 618 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 GPD1LQ8N335 351 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 PSPC1Q8WXF1 523 aaKnown RBP15.43■□□□□ 0.06
CACNB1-206ENST00000539338 TRIM51Q9BSJ1 452 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 RBAKQ9NYW8 714 aaPredicted RBP15.43■□□□□ 0.06
CACNB1-206ENST00000539338 KLHL8Q9P2G9 620 aaPredicted RBP15.43■□□□□ 0.06
CACNB1-206ENST00000539338 SLC12A6Q9UHW9 1150 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 ZFP69BQ9UJL9 534 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 ANGPTL2Q9UKU9 493 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 STRIP2Q9ULQ0 834 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 RAG1P15918 1043 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 IZUMO3Q5VZ72 239 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 RNF139Q8WU17 664 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 CHMP6Q96FZ7 201 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms