RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 KIAA0319Q5VV43 1072 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 RINT1Q6NUQ1 792 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 DTHD1Q6ZMT9 781 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 C1orf186Q6ZWK4 172 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 RBM23Q86U06 439 aaKnown RBP8.01□□□□□ -1.13
LMO3-220ENST00000539232 IFNLR1Q8IU57 520 aaPredicted RBP8.01□□□□□ -1.13
LMO3-220ENST00000539232 ERMNQ8TAM6 284 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 POF1BQ8WVV4 589 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 AUTS2Q8WXX7 1259 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 SNX21Q969T3 373 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 EPSTI1Q96J88 318 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 USP28Q96RU2 1077 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 TRAIPQ9BWF2 469 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 APOL6Q9BWW8 343 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 IKZF4Q9H2S9 585 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 FZD8Q9H461 694 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 IGFLR1Q9H665 355 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 NRDE2Q9H7Z3 1164 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 CHST12Q9NRB3 414 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 TBC1D13Q9NVG8 400 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 KLK14Q9P0G3 267 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 TFIP11Q9UBB9 837 aaKnown RBP8.01□□□□□ -1.13
LMO3-220ENST00000539232 CD207Q9UJ71 328 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 CDH22Q9UJ99 828 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 FBXO2Q9UK22 296 aaPredicted RBP8.01□□□□□ -1.13
LMO3-220ENST00000539232 PPME1Q9Y570 386 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 IPPQ9Y573 584 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 FRYLO94915 3013 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 A0A087X0B3 334 aa8□□□□□ -1.13
LMO3-220ENST00000539232 FSCN2O14926 492 aa8□□□□□ -1.13
LMO3-220ENST00000539232 ASAP2O43150 1006 aa8□□□□□ -1.13
LMO3-220ENST00000539232 ZNF623O75123 536 aa8□□□□□ -1.13
LMO3-220ENST00000539232 TBX10O75333 385 aa8□□□□□ -1.13
LMO3-220ENST00000539232 NPTXRO95502 500 aa8□□□□□ -1.13
LMO3-220ENST00000539232 EYA4O95677 639 aa8□□□□□ -1.13
LMO3-220ENST00000539232 GLP2RO95838 553 aa8□□□□□ -1.13
LMO3-220ENST00000539232 PDGFBP01127 241 aaPredicted RBP8□□□□□ -1.13
LMO3-220ENST00000539232 POMCP01189 267 aa8□□□□□ -1.13
LMO3-220ENST00000539232 LMNAP02545 664 aaKnown RBP8□□□□□ -1.13
LMO3-220ENST00000539232 SSBP05455 408 aaKnown RBP eCLIP8□□□□□ -1.13
LMO3-220ENST00000539232 RB1P06400 928 aa8□□□□□ -1.13
LMO3-220ENST00000539232 SDHBP21912 280 aa8□□□□□ -1.13
LMO3-220ENST00000539232 NPTX2P47972 431 aa8□□□□□ -1.13
LMO3-220ENST00000539232 SLC11A1P49279 550 aa8□□□□□ -1.13
LMO3-220ENST00000539232 SLC12A3P55017 1021 aa8□□□□□ -1.13
LMO3-220ENST00000539232 BCAR1P56945 870 aa8□□□□□ -1.13
LMO3-220ENST00000539232 KARSQ15046 597 aaKnown RBP8□□□□□ -1.13
LMO3-220ENST00000539232 RSPO4Q2I0M5 234 aaPredicted RBP8□□□□□ -1.13
LMO3-220ENST00000539232 FOXD4L6Q3SYB3 417 aaPredicted RBP8□□□□□ -1.13
LMO3-220ENST00000539232 HYIQ5T013 277 aa8□□□□□ -1.13
LMO3-220ENST00000539232 CDCA2Q69YH5 1023 aaPredicted RBP8□□□□□ -1.13
LMO3-220ENST00000539232 KANK3Q6NY19 840 aa8□□□□□ -1.13
LMO3-220ENST00000539232 KCNT2Q6UVM3 1135 aa8□□□□□ -1.13
LMO3-220ENST00000539232 FOXD4L3Q6VB84 417 aaPredicted RBP8□□□□□ -1.13
LMO3-220ENST00000539232 TAS1R1Q7RTX1 841 aa8□□□□□ -1.13
LMO3-220ENST00000539232 SLC39A11Q8N1S5 342 aa8□□□□□ -1.13
LMO3-220ENST00000539232 TMEM105Q8N8V8 129 aa8□□□□□ -1.13
LMO3-220ENST00000539232 GSTCDQ8NEC7 633 aa8□□□□□ -1.13
LMO3-220ENST00000539232 KCNG4Q8TDN1 519 aa8□□□□□ -1.13
LMO3-220ENST00000539232 TCP11Q8WWU5 503 aa8□□□□□ -1.13
LMO3-220ENST00000539232 INTS4Q96HW7 963 aaKnown RBP8□□□□□ -1.13
LMO3-220ENST00000539232 SAMD11Q96NU1 681 aa8□□□□□ -1.13
LMO3-220ENST00000539232 GAD1Q99259 594 aa8□□□□□ -1.13
LMO3-220ENST00000539232 JPH2Q9BR39 696 aaPredicted RBP8□□□□□ -1.13
LMO3-220ENST00000539232 C11orf84Q9BUA3 381 aaPredicted RBP8□□□□□ -1.13
LMO3-220ENST00000539232 PLVAPQ9BX97 442 aa8□□□□□ -1.13
LMO3-220ENST00000539232 PANK2Q9BZ23 570 aa8□□□□□ -1.13
LMO3-220ENST00000539232 GBP3Q9H0R5 595 aa8□□□□□ -1.13
LMO3-220ENST00000539232 CSRNP2Q9H175 543 aa8□□□□□ -1.13
LMO3-220ENST00000539232 PDZD7Q9H5P4 517 aa8□□□□□ -1.13
LMO3-220ENST00000539232 BLOC1S4Q9NUP1 217 aa8□□□□□ -1.13
LMO3-220ENST00000539232 ZDHHC9Q9Y397 364 aa8□□□□□ -1.13
LMO3-220ENST00000539232 A0A1B0GUA9 196 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 ARL5CA6NH57 179 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 SOBPA7XYQ1 873 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 LAD1O00515 517 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 ABLIM1O14639 778 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 STX6O43752 255 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 ZC3H11AO75152 810 aaKnown RBP eCLIP7.99□□□□□ -1.13
LMO3-220ENST00000539232 EOMESO95936 686 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 GALTP07902 379 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 PLA2G4BP0C869 781 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 PLCG1P19174 1290 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 MLH1P40692 756 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 NRIP1P48552 1158 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 SCNN1GP51170 649 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 CDC42EP1Q00587 391 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 POU5F1BQ06416 359 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 ADAM15Q13444 863 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 DHX8Q14562 1220 aaKnown RBP7.99□□□□□ -1.13
LMO3-220ENST00000539232 MCM6Q14566 821 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 MXD4Q14582 209 aaPredicted RBP7.99□□□□□ -1.13
LMO3-220ENST00000539232 PTPN21Q16825 1174 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 NAALADL2Q58DX5 795 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 NOMO2Q5JPE7 1267 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 ODR4Q5SWX8 454 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 SPOUT1Q5T280 376 aaKnown RBP7.99□□□□□ -1.13
LMO3-220ENST00000539232 KRT79Q5XKE5 535 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 BRAPQ7Z569 592 aa7.99□□□□□ -1.13
LMO3-220ENST00000539232 CABP7Q86V35 215 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms