RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 MYH15Q9Y2K3 1946 aa13.51□□□□□ -0.25
YBX3-207ENST00000539204 ZFYVE26Q68DK2 2539 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 ARL5CA6NH57 179 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 hCG_1984214I3L0E3 225 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 TM4SF5O14894 197 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 HRO43593 1189 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 ECI2O75521 394 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 NCLP19338 710 aaKnown RBP13.5□□□□□ -0.25
YBX3-207ENST00000539204 HOXA11P31270 313 aaPredicted RBP13.5□□□□□ -0.25
YBX3-207ENST00000539204 AASDHQ4L235 1098 aaPredicted RBP13.5□□□□□ -0.25
YBX3-207ENST00000539204 XKR3Q5GH77 459 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 FUT10Q6P4F1 479 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 SYNE3Q6ZMZ3 975 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 ZNF713Q8N859 430 aaPredicted RBP13.5□□□□□ -0.25
YBX3-207ENST00000539204 GPR62Q9BZJ7 368 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 LMAN1LQ9HAT1 526 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 IFT122Q9HBG6 1241 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 BARHL2Q9NY43 387 aa13.5□□□□□ -0.25
YBX3-207ENST00000539204 SEPT9Q9UHD8 586 aaPredicted RBP13.5□□□□□ -0.25
YBX3-207ENST00000539204 SOBPA7XYQ1 873 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 C1QTNF9BB2RNN3 333 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 F8W810 466 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 CCL16O15467 120 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 MAFO75444 373 aaPredicted RBP13.49□□□□□ -0.25
YBX3-207ENST00000539204 TADA2AO75478 443 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 C8AP07357 584 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 C1QTNF9P0C862 333 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 SFNP31947 248 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 JAK3P52333 1124 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 DSC1Q08554 894 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 UGCGQ16739 394 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 UBXN11Q5T124 520 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 UNQ6494/PRO21346Q6UXR6 183 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 SMC5Q8IY18 1101 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 GAD1Q99259 594 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 JPH2Q9BR39 696 aaPredicted RBP13.49□□□□□ -0.25
YBX3-207ENST00000539204 SH2D3AQ9BRG2 576 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 PLA2G2FQ9BZM2 168 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 MIOSQ9NXC5 875 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 FBXW11Q9UKB1 542 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 ZZEF1O43149 2961 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 DOCK6Q96HP0 2047 aa13.49□□□□□ -0.25
YBX3-207ENST00000539204 SHISA7A6NL88 538 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 CHMP2AO43633 222 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 HOXA9P31269 272 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 PRSS55Q6UWB4 352 aaPredicted RBP13.48□□□□□ -0.25
YBX3-207ENST00000539204 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 MICU3Q86XE3 530 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 ZNF687Q8N1G0 1237 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 C12orf50Q8NA57 414 aaPredicted RBP13.48□□□□□ -0.25
YBX3-207ENST00000539204 KDF1Q8NAX2 398 aaPredicted RBP13.48□□□□□ -0.25
YBX3-207ENST00000539204 SMG8Q8ND04 991 aaKnown RBP13.48□□□□□ -0.25
YBX3-207ENST00000539204 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 MCRS1Q96EZ8 462 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 CEP89Q96ST8 783 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 RWDD1Q9H446 243 aaPredicted RBP13.48□□□□□ -0.25
YBX3-207ENST00000539204 RBM28Q9NW13 759 aaKnown RBP13.48□□□□□ -0.25
YBX3-207ENST00000539204 GDE1Q9NZC3 331 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 ADAM28Q9UKQ2 775 aa13.48□□□□□ -0.25
YBX3-207ENST00000539204 MRPS23Q9Y3D9 190 aaKnown RBP13.48□□□□□ -0.25
YBX3-207ENST00000539204 SPEGQ15772 3267 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 RALGAPA1Q6GYQ0 2036 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 DDX11L8A8MPP1 907 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 CHURC1-FNTBB4DL54 471 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 GAS7O60861 476 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 KCNK5O95279 499 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 SRGAP2CP0DJJ0 459 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 MLH1P40692 756 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 FNTBP49356 437 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 SCNN1GP51170 649 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 NUCB1Q02818 461 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 PABPC1LQ4VXU2 614 aaKnown RBP13.47□□□□□ -0.25
YBX3-207ENST00000539204 TANGO2Q6ICL3 276 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 CEP68Q76N32 757 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 LONP2Q86WA8 852 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 FAM3CQ92520 227 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 MAP4K1Q92918 833 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 RIT2Q99578 217 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 CLSTN3Q9BQT9 956 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 BRD9Q9H8M2 597 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 DNMT3BQ9UBC3 853 aaKnown RBP13.47□□□□□ -0.25
YBX3-207ENST00000539204 IPPQ9Y573 584 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 COL4A3BPQ9Y5P4 624 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 F5P12259 2224 aa13.47□□□□□ -0.25
YBX3-207ENST00000539204 CNTNAP5Q8WYK1 1306 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 TMEM150BA6NC51 233 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 MSH4O15457 936 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 ZNF806P0C7X5 589 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 CIITAP33076 1130 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 SATB1Q01826 763 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 NCBP1Q09161 790 aaKnown RBP13.46□□□□□ -0.25
YBX3-207ENST00000539204 SRSF5Q13243 272 aaKnown RBP13.46□□□□□ -0.25
YBX3-207ENST00000539204 STPG1Q5TH74 334 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 LRSAM1Q6UWE0 723 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 MIER3Q7Z3K6 550 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 CEP57Q86XR8 500 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms