RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 CEP290O15078 2479 aa11.17□□□□□ -0.62
CLPB-210ENST00000539148 ABHD14A-ACY1A0A1B0GW23 586 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 MAPK13O15264 365 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 OGTO15294 1046 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 SLC16A3O15427 465 aaKnown RBP11.16□□□□□ -0.62
CLPB-210ENST00000539148 HOXA2O43364 376 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 STX10O60499 249 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 TSPAN1O60635 241 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 EXOC3O60645 756 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 NR3C1P04150 777 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 STAG3L1P0CL83 205 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 EPB41P11171 864 aaKnown RBP11.16□□□□□ -0.62
CLPB-210ENST00000539148 KRT13P13646 458 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 ARF4P18085 180 aaPredicted RBP11.16□□□□□ -0.62
CLPB-210ENST00000539148 NR2F2P24468 414 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 PSMC2P35998 433 aaKnown RBP11.16□□□□□ -0.62
CLPB-210ENST00000539148 CASP5P51878 434 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 TERF1P54274 439 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 GSDMDP57764 484 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 ADAM9Q13443 819 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 LPIN1Q14693 890 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 SPATA1Q5VX52 437 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 CNKSR3Q6P9H4 555 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.16□□□□□ -0.62
CLPB-210ENST00000539148 CD302Q8IX05 232 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 SMYD4Q8IYR2 804 aaPredicted RBP11.16□□□□□ -0.62
CLPB-210ENST00000539148 C7orf61Q8IZ16 206 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 ZNF668Q96K58 619 aaPredicted RBP11.16□□□□□ -0.62
CLPB-210ENST00000539148 TARS2Q9BW92 718 aaKnown RBP11.16□□□□□ -0.62
CLPB-210ENST00000539148 KCTD10Q9H3F6 313 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 ERVK-5Q9HDB9 667 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 AGPAT3Q9NRZ7 376 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 ANKFY1Q9P2R3 1169 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 AGO2Q9UKV8 859 aaKnown RBP11.16□□□□□ -0.62
CLPB-210ENST00000539148 CTNND2Q9UQB3 1225 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 STYXL1Q9Y6J8 313 aa11.16□□□□□ -0.62
CLPB-210ENST00000539148 SCN5AQ14524 2016 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 MICAL3Q7RTP6 2002 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 A0A0B4J269 797 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 CARNS1A5YM72 827 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 ZNF233A6NK53 670 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 XPOTO43592 962 aaKnown RBP11.15□□□□□ -0.62
CLPB-210ENST00000539148 EXTL3O43909 919 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 BAIAP3O94812 1187 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 EOMESO95936 686 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 CXCL10P02778 98 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 CLTAP09496 248 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
CLPB-210ENST00000539148 BMP6P22004 513 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 CD52P31358 61 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 CYP2C18P33260 490 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 CCL23P55773 120 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 FPGSQ05932 587 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 ENPEPQ07075 957 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 MCL1Q07820 350 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 PLEKHG4Q58EX7 1191 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 PSRC1Q6PGN9 363 aaPredicted RBP11.15□□□□□ -0.62
CLPB-210ENST00000539148 SLC24A5Q71RS6 500 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 INTS8Q75QN2 995 aaKnown RBP11.15□□□□□ -0.62
CLPB-210ENST00000539148 FAM228AQ86W67 206 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 GPD1LQ8N335 351 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 WNT8BQ93098 351 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 THAP9Q9H5L6 903 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 MINDY3Q9H8M7 445 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
CLPB-210ENST00000539148 R3HCC1Q9Y3T6 440 aaKnown RBP11.15□□□□□ -0.62
CLPB-210ENST00000539148 ZMYM2Q9UBW7 1377 aa11.15□□□□□ -0.63
CLPB-210ENST00000539148 ZNF623O75123 536 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 IL18RAPO95256 599 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 EEF1GP26641 437 aaKnown RBP11.14□□□□□ -0.63
CLPB-210ENST00000539148 KCNJ6P48051 423 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 ZNF75DP51815 510 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 AP3M2P53677 418 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 CETN1Q12798 172 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 AMHR2Q16671 573 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 CCDC40Q4G0X9 1142 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 ZCWPW2Q504Y3 356 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 CEP135Q66GS9 1140 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 ANKRD40Q6AI12 368 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 TTI2Q6NXR4 508 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 FILIP1Q7Z7B0 1213 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 LUZP1Q86V48 1076 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 DRC7Q8IY82 874 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 TMEM40Q8WWA1 233 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 ACAP3Q96P50 834 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 PDZD7Q9H5P4 517 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 RPF1Q9H9Y2 349 aaKnown RBP11.14□□□□□ -0.63
CLPB-210ENST00000539148 PLEKHA5Q9HAU0 1116 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 IL23AQ9NPF7 189 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 RGS18Q9NS28 235 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 HSPBP1Q9NZL4 362 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 ARMCX3Q9UH62 379 aaPredicted RBP11.14□□□□□ -0.63
CLPB-210ENST00000539148 LRFN2Q9ULH4 789 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 NFE2L3Q9Y4A8 694 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 RALGAPA2Q2PPJ7 1873 aa11.14□□□□□ -0.63
CLPB-210ENST00000539148 TDRD15B5MCY1 1934 aaKnown RBP11.13□□□□□ -0.63
CLPB-210ENST00000539148 A0A0U1RQF3 1178 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 B4GALT5O43286 388 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 TGFB1I1O43294 461 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms