RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 NFIL3Q16649 462 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 FOXR2Q6PJQ5 311 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 LRRC55Q6ZSA7 311 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 CSGALNACT2Q8N6G5 542 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 CEP120Q8N960 986 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 NOC3LQ8WTT2 800 aaKnown RBP25.66■■□□□ 1.7
TMEM260-202ENST00000538838 APBB2Q92870 758 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 ADAM2Q99965 735 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 MCF2P10911 925 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 DCAF4L1Q3SXM0 396 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 SEZ6Q53EL9 994 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 ZBTB41Q5SVQ8 909 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 SLC9A9Q8IVB4 645 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 DHX40Q8IX18 779 aaKnown RBP25.66■■□□□ 1.7
TMEM260-202ENST00000538838 ZC3H3Q8IXZ2 948 aaKnown RBP25.66■■□□□ 1.7
TMEM260-202ENST00000538838 ENOX1Q8TC92 643 aaKnown RBP25.66■■□□□ 1.7
TMEM260-202ENST00000538838 DMAC2Q9NW81 257 aa25.66■■□□□ 1.7
TMEM260-202ENST00000538838 AGO2Q9UKV8 859 aaKnown RBP25.66■■□□□ 1.7
TMEM260-202ENST00000538838 RALGAPA2Q2PPJ7 1873 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 CITO14578 2027 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 GOLGA8IPA6NC78 632 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 GOLGA8JA6NMD2 632 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 FKBP3Q00688 224 aaKnown RBP25.65■■□□□ 1.7
TMEM260-202ENST00000538838 ADAM9Q13443 819 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 IQCB1Q15051 598 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 FAM200AQ8TCP9 573 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 FTHL17Q9BXU8 183 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 TRIM6Q9C030 488 aaPredicted RBP25.65■■□□□ 1.7
TMEM260-202ENST00000538838 NFE2L3Q9Y4A8 694 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 ANK1P16157 1881 aa25.65■■□□□ 1.7
TMEM260-202ENST00000538838 FAM189A1O60320 539 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 CAVIN2O95810 425 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 ACRP10323 421 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 RPL13P26373 211 aaKnown RBP25.64■■□□□ 1.7
TMEM260-202ENST00000538838 CASP4P49662 377 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 FPGSQ05932 587 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 TPD52L1Q16890 204 aaPredicted RBP25.64■■□□□ 1.7
TMEM260-202ENST00000538838 SPATA1Q5VX52 437 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 CNKSR3Q6P9H4 555 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 RTN4RL1Q86UN2 441 aaPredicted RBP25.64■■□□□ 1.7
TMEM260-202ENST00000538838 GAS2L3Q86XJ1 694 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 THNSL1Q8IYQ7 743 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 XXYLT1Q8NBI6 393 aa25.64■■□□□ 1.7
TMEM260-202ENST00000538838 NXF3Q9H4D5 531 aaKnown RBP25.64■■□□□ 1.7
TMEM260-202ENST00000538838 OGTO15294 1046 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 EXOC3O60645 756 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 OSTNP61366 133 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 MYBPC2Q14324 1141 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 NCAPHQ15003 741 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 CEP135Q66GS9 1140 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 APBB1IPQ7Z5R6 666 aaPredicted RBP25.63■■□□□ 1.69
TMEM260-202ENST00000538838 LUZP1Q86V48 1076 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 GPD1LQ8N335 351 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 TMEM174Q8WUU8 243 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 FAM213AQ9BRX8 229 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 SRRTQ9BXP5 876 aaKnown RBP25.63■■□□□ 1.69
TMEM260-202ENST00000538838 IL23AQ9NPF7 189 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 RGS18Q9NS28 235 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 FAM105AQ9NUU6 356 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 HES2Q9Y543 173 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 CETN3O15182 167 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 IBSPP21815 317 aaPredicted RBP25.63■■□□□ 1.69
TMEM260-202ENST00000538838 TNFSF9P41273 254 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 ACOT2P49753 483 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 PPIGQ13427 754 aaKnown RBP eCLIP25.63■■□□□ 1.69
TMEM260-202ENST00000538838 TMEM192Q8IY95 271 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 RNF214Q8ND24 703 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 TSPYL2Q9H2G4 693 aaPredicted RBP25.63■■□□□ 1.69
TMEM260-202ENST00000538838 IPPQ9Y573 584 aa25.63■■□□□ 1.69
TMEM260-202ENST00000538838 IKBKBO14920 756 aa25.62■■□□□ 1.69
TMEM260-202ENST00000538838 KIAA0391O15091 583 aaKnown RBP25.62■■□□□ 1.69
TMEM260-202ENST00000538838 EXTL3O43909 919 aa25.62■■□□□ 1.69
TMEM260-202ENST00000538838 PFKMP08237 780 aa25.62■■□□□ 1.69
TMEM260-202ENST00000538838 HSP90AA4PQ58FG1 418 aa25.62■■□□□ 1.69
TMEM260-202ENST00000538838 CRELD2Q6UXH1 353 aaPredicted RBP25.62■■□□□ 1.69
TMEM260-202ENST00000538838 CBWD2Q8IUF1 395 aa25.62■■□□□ 1.69
TMEM260-202ENST00000538838 RPUSD2Q8IZ73 545 aaKnown RBP25.62■■□□□ 1.69
TMEM260-202ENST00000538838 RDH13Q8NBN7 331 aa25.62■■□□□ 1.69
TMEM260-202ENST00000538838 SMG8Q8ND04 991 aaKnown RBP25.62■■□□□ 1.69
TMEM260-202ENST00000538838 CEP63Q96MT8 703 aa25.62■■□□□ 1.69
TMEM260-202ENST00000538838 PCDHB2Q9Y5E7 798 aa25.62■■□□□ 1.69
TMEM260-202ENST00000538838 TNRC18O15417 2968 aaPredicted RBP25.62■■□□□ 1.69
TMEM260-202ENST00000538838 TRIP11Q15643 1979 aa25.61■■□□□ 1.69
TMEM260-202ENST00000538838 AKAP3O75969 853 aa25.61■■□□□ 1.69
TMEM260-202ENST00000538838 FBXL18Q96ME1 805 aa25.61■■□□□ 1.69
TMEM260-202ENST00000538838 TRAIPQ9BWF2 469 aa25.61■■□□□ 1.69
TMEM260-202ENST00000538838 APOL6Q9BWW8 343 aa25.61■■□□□ 1.69
TMEM260-202ENST00000538838 SAMSN1Q9NSI8 373 aaKnown RBP25.61■■□□□ 1.69
TMEM260-202ENST00000538838 NR2E3Q9Y5X4 410 aa25.61■■□□□ 1.69
TMEM260-202ENST00000538838 PTPRSQ13332 1948 aa25.6■■□□□ 1.69
TMEM260-202ENST00000538838 PDCD11Q14690 1871 aaKnown RBP25.6■■□□□ 1.69
TMEM260-202ENST00000538838 BECN2A8MW95 431 aa25.6■■□□□ 1.69
TMEM260-202ENST00000538838 C9IYK1 514 aa25.6■■□□□ 1.69
TMEM260-202ENST00000538838 ADRB2P07550 413 aa25.6■■□□□ 1.69
TMEM260-202ENST00000538838 STAG3L1P0CL83 205 aa25.6■■□□□ 1.69
TMEM260-202ENST00000538838 GRM5P41594 1212 aa25.6■■□□□ 1.69
TMEM260-202ENST00000538838 EPHB4P54760 987 aa25.6■■□□□ 1.69
TMEM260-202ENST00000538838 SNRNP35Q16560 246 aaKnown RBP25.6■■□□□ 1.69
TMEM260-202ENST00000538838 FANCLQ9NW38 375 aa25.6■■□□□ 1.69
TMEM260-202ENST00000538838 FRMD4BQ9Y2L6 1034 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms