RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 TMEM179Q6ZVK1 233 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 LONP2Q86WA8 852 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 FOXP4Q8IVH2 680 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-208ENST00000538570 FAM213AQ9BRX8 229 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 ASAP1Q9ULH1 1129 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 DEAF1O75398 565 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-208ENST00000538570 LRRC14Q15048 493 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 MIGA2Q7L4E1 593 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 TTC30BQ8N4P2 665 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 INTS2Q9H0H0 1204 aaKnown RBP10.52□□□□□ -0.73
COL4A6-208ENST00000538570 STMN3Q9NZ72 180 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 ZBTB1Q9Y2K1 713 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 AP1G2O75843 785 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 GRK2P25098 689 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 GNA15P30679 374 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 CCDC137Q6PK04 289 aaKnown RBP10.52□□□□□ -0.73
COL4A6-208ENST00000538570 PADI6Q6TGC4 694 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 RFX8Q6ZV50 586 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 ELMOD1Q8N336 334 aa10.52□□□□□ -0.73
COL4A6-208ENST00000538570 COPG1Q9Y678 874 aaKnown RBP10.52□□□□□ -0.73
COL4A6-208ENST00000538570 MAFGO15525 162 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 IREB2P48200 963 aaKnown RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 PRAMEP78395 509 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 KNOP1Q1ED39 458 aaKnown RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 RRM2BQ7LG56 351 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 SCN4BQ8IWT1 228 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 RHOT1Q8IXI2 618 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 OTUB1Q96FW1 271 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 SP110Q9HB58 689 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 PCSK1NQ9UHG2 260 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 MAGI2Q86UL8 1455 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 F5H423 210 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 H0Y626 953 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 TRIM16O95361 564 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 FTLP02792 175 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 GNAT1P11488 350 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 HSPA9P38646 679 aaKnown RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 GUCY1A3Q02108 690 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 DHX34Q14147 1143 aaKnown RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 HIC1Q14526 733 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 PFKFB3Q16875 520 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 FASTKD1Q53R41 847 aaKnown RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 ZNF473Q8WTR7 871 aaKnown RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 DDX47Q9H0S4 455 aaKnown RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 EPN3Q9H201 632 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 KDM4CQ9H3R0 1056 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 RUBCNLQ9H714 662 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 CAB39Q9Y376 341 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 TMEM94Q12767 1356 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 POTEMA6NI47 508 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 DDX5P17844 614 aaKnown RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 SERPINB4P48594 390 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 KRT72Q14CN4 511 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 ZNF341Q9BYN7 854 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 TRIM54Q9BYV2 358 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 WWP1Q9H0M0 922 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 BFARQ9NZS9 450 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 USP27XA6NNY8 438 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 ZBTB5O15062 677 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 TYK2P29597 1187 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 CORO7P57737 925 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 PTPN12Q05209 780 aaKnown RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 DRAP1Q14919 205 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-208ENST00000538570 EFHC2Q5JST6 749 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 FAM83BQ5T0W9 1011 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 IZUMO3Q5VZ72 239 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 NLRP10Q86W26 655 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 PBXIP1Q96AQ6 731 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 SLC9A2Q9UBY0 812 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 KCNA2P16389 499 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 NCAPHQ15003 741 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 LRRC8BQ6P9F7 803 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 TRIM72Q6ZMU5 477 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 RNF135Q8IUD6 432 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 RUBCNQ92622 972 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 TRIM8Q9BZR9 551 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 CD248Q9HCU0 757 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 DKK3Q9UBP4 350 aa10.51□□□□□ -0.73
COL4A6-208ENST00000538570 NEMP1O14524 444 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 SLC16A4O15374 487 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 PJA2O43164 708 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 VCPP55072 806 aaKnown RBP10.5□□□□□ -0.73
COL4A6-208ENST00000538570 NFX1Q12986 1120 aaKnown RBP10.5□□□□□ -0.73
COL4A6-208ENST00000538570 INPP5AQ14642 412 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 CYTH1Q15438 398 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 ARL8AQ96BM9 186 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 MTA3Q9BTC8 594 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 OSBPL5Q9H0X9 879 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-208ENST00000538570 PFASO15067 1338 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 UBA6A0AVT1 1052 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-208ENST00000538570 ESYT3A0FGR9 886 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 BCAR1P56945 870 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 MRPS35P82673 323 aaKnown RBP10.5□□□□□ -0.73
COL4A6-208ENST00000538570 TAP1Q03518 808 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 STXBP2Q15833 593 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 ANKRD7Q92527 254 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 TBC1D22BQ9NU19 505 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 NDFIP2Q9NV92 336 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 PKD2L2Q9NZM6 624 aa10.5□□□□□ -0.73
COL4A6-208ENST00000538570 PGM1P36871 562 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms