RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 A8MXQ7 604 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 PJA2O43164 708 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 SOX6P35712 828 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 PMS1P54277 932 aaKnown RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 UGP2Q16851 508 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 HEATR6Q6AI08 1181 aaKnown RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 ERP27Q96DN0 273 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 FAM193BQ96PV7 902 aaPredicted RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 CYP4F11Q9HBI6 524 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 NPHS2Q9NP85 383 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 TBKBP1A7MCY6 615 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 GSNP06396 782 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 XPAP23025 273 aaPredicted RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 SCTRP47872 440 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 NCAPG2Q86XI2 1143 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 PIGOQ8TEQ8 1089 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 ZNF496Q96IT1 587 aaPredicted RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 AGPAT1Q99943 283 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 EPC1Q9H2F5 836 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 ADD3Q9UEY8 706 aaKnown RBP7.31□□□□□ -1.24
SORT1-209ENST00000538502 APPL1Q9UKG1 709 aa7.31□□□□□ -1.24
SORT1-209ENST00000538502 MED14O60244 1454 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 CLASP2O75122 1294 aaKnown RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 HLA-DPA1P20036 260 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 BCAMP50895 628 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 SNRPFP62306 86 aaKnown RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 ATP2C1P98194 919 aaPredicted RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 MECOMQ03112 1051 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 PTPN21Q16825 1174 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 CEP78Q5JTW2 689 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 CATSPER3Q86XQ3 398 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 GIMAP8Q8ND71 665 aaPredicted RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 MCPH1Q8NEM0 835 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 HPS3Q969F9 1004 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 CEP170P1Q96L14 293 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 BFARQ9NZS9 450 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 KPNA4O00629 521 aaPredicted RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 SUPT3HO75486 399 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 FTLP02792 175 aaPredicted RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 PHKG2P15735 406 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 YY1P25490 414 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 TYK2P29597 1187 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 VAMP7P51809 220 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 NAB2Q15742 525 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 RSPH1Q8WYR4 309 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 PIGSQ96S52 555 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 FSD1LQ9BXM9 530 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 PAPOLBQ9NRJ5 636 aaKnown RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 ETAA1Q9NY74 926 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 DTNAQ9Y4J8 743 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 PHF20L1A8MW92 1017 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 APOL1O14791 398 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 AKAP10O43572 662 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 FGFR4P22455 802 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 ARSEP51690 589 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 DRAP1Q14919 205 aaPredicted RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 TRIP10Q15642 601 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 ZYXQ15942 572 aaKnown RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 IL17REQ8NFR9 667 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 FAM149B1Q96BN6 582 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 TRAPPC9Q96Q05 1148 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 MSTO1Q9BUK6 570 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 LZTS1Q9Y250 596 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 MYO5CQ9NQX4 1742 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 TRPC5OSA6NMA1 111 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 SRRM3A6NNA2 597 aaPredicted RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 HMOX2P30519 316 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 PRELPP51888 382 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 SPDYCQ5MJ68 293 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 RIN3Q8TB24 985 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 SH3TC2Q8TF17 1288 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 CAVIN3Q969G5 261 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 FAR2Q96K12 515 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 MANSC1Q9H8J5 431 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 ZNF556Q9HAH1 456 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 TLR7Q9NYK1 1049 aaKnown RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 TUBE1Q9UJT0 475 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 CDHR2Q9BYE9 1310 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 ATP6V1G2O95670 118 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 PRR29P0C7W0 189 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 POLD1P28340 1107 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 ZNF200P98182 395 aaPredicted RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 ZNF667Q5HYK9 610 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 ZNF710Q8N1W2 664 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 SCFD1Q8WVM8 642 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 STK33Q9BYT3 514 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 KLHL4Q9C0H6 718 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 VPS33BQ9H267 617 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 TMBIM4Q9HC24 238 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 XDHP47989 1333 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 SYNJ2BP-COX16A0A087WUM0 186 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 ESYT3A0FGR9 886 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 H0YIN7 160 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 PDXKO00764 312 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 EIF2S1P05198 315 aaKnown RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 CALB2P22676 271 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 SIKE1Q9BRV8 207 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 MMADHCQ9H3L0 296 aaPredicted RBP7.3□□□□□ -1.24
SORT1-209ENST00000538502 COX16Q9P0S2 106 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 AMACRQ9UHK6 382 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms