RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 FAM204AQ9H8W3 233 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 MAFBQ9Y5Q3 323 aaPredicted RBP15.13■□□□□ 0.01
LIMK1-208ENST00000538333 SYNGAP1Q96PV0 1343 aa15.13■□□□□ 0.01
LIMK1-208ENST00000538333 CCDC188H7C350 402 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 HNRNPDLO14979 420 aaKnown RBP15.12■□□□□ 0.01
LIMK1-208ENST00000538333 CLSTN1O94985 981 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 FAM153BP0C7A2 387 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 CNTN2Q02246 1040 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 PRPF4BQ13523 1007 aaKnown RBP15.12■□□□□ 0.01
LIMK1-208ENST00000538333 TRADDQ15628 312 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 STXBP2Q15833 593 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 FAM153CQ494X1 144 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 TREML2Q5T2D2 321 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 GPD1LQ8N335 351 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 FBXL13Q8NEE6 735 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 AP1M1Q9BXS5 423 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.12■□□□□ 0.01
LIMK1-208ENST00000538333 FAM153AQ9UHL3 310 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 CYP26A1O43174 497 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 SART1O43290 800 aaKnown RBP15.12■□□□□ 0.01
LIMK1-208ENST00000538333 RTN2O75298 545 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 GZMAP12544 262 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 ITGA4P13612 1032 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 LMAN1P49257 510 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 MFAP3P55082 362 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 ERVK-9P63128 1117 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 MTERF2Q49AM1 385 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 SV2AQ7L0J3 742 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 CYFIP1Q7L576 1253 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 SLC47A2Q86VL8 602 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 MREGQ8N565 214 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 EIF1ADQ8N9N8 165 aaKnown RBP15.12■□□□□ 0.01
LIMK1-208ENST00000538333 IFT74Q96LB3 600 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 ACP6Q9NPH0 428 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 RAB20Q9NX57 234 aa15.12■□□□□ 0.01
LIMK1-208ENST00000538333 DIS3Q9Y2L1 958 aaKnown RBP15.12■□□□□ 0.01
LIMK1-208ENST00000538333 LRRC37A2A6NM11 1700 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 FAM170AA1A519 330 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 KRIT1O00522 736 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 PEX10O60683 326 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 USP8P40818 1118 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 FMO1Q01740 532 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 EMC2Q15006 297 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 ALS2CLQ60I27 953 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 C15orf39Q6ZRI6 1047 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 IFT81Q8WYA0 676 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 CEP89Q96ST8 783 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 DDX47Q9H0S4 455 aaKnown RBP15.11■□□□□ 0.01
LIMK1-208ENST00000538333 CARD9Q9H257 536 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 DHX33Q9H6R0 707 aaKnown RBP15.11■□□□□ 0.01
LIMK1-208ENST00000538333 BTBD7Q9P203 1132 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 IGKV6D-21A0A0A0MT36 114 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 H0YCG3 227 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 ECHS1P30084 290 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 ABCD1P33897 745 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 ALDH5A1P51649 535 aaPredicted RBP15.11■□□□□ 0.01
LIMK1-208ENST00000538333 GPC5P78333 572 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 C11orf63Q6NUN7 778 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 DLK2Q6UY11 383 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 USP37Q86T82 979 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 NT5C1BQ96P26 610 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 TAF1DQ9H5J8 278 aaPredicted RBP15.11■□□□□ 0.01
LIMK1-208ENST00000538333 ZNF302Q9NR11 478 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 STYXL1Q9Y6J8 313 aa15.11■□□□□ 0.01
LIMK1-208ENST00000538333 MTA2O94776 668 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 OATP04181 439 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 MMEP08473 750 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 CYP11B1P15538 503 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 CLDN10P78369 228 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 POU5F1Q01860 360 aaKnown RBP15.1■□□□□ 0.01
LIMK1-208ENST00000538333 TAF3Q5VWG9 929 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 RIOX2Q8IUF8 465 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 ANKRD35Q8N283 1001 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 WHAMMQ8TF30 809 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.1■□□□□ 0.01
LIMK1-208ENST00000538333 FAM213AQ9BRX8 229 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 SLITRK6Q9H5Y7 841 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 ALG6Q9Y672 507 aa15.1■□□□□ 0.01
LIMK1-208ENST00000538333 DLATP10515 647 aaKnown RBP15.09■□□□□ 0.01
LIMK1-208ENST00000538333 EDNRBP24530 442 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 POLGP54098 1239 aaPredicted RBP15.09■□□□□ 0.01
LIMK1-208ENST00000538333 IQCKQ8N0W5 287 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 ASAP3Q8TDY4 903 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 AFAP1L1Q8TED9 768 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 DDX1Q92499 740 aaKnown RBP15.09■□□□□ 0.01
LIMK1-208ENST00000538333 ZNF516Q92618 1163 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 ALG3Q92685 438 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 TATDN2Q93075 761 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 PORCNQ9H237 461 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 SPON1Q9HCB6 807 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 KCNG1Q9UIX4 513 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 EXTL3O43909 919 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 FGGP02679 453 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 UBA1P22314 1058 aaKnown RBP15.09■□□□□ 0.01
LIMK1-208ENST00000538333 GLRA2P23416 452 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 GCNT1Q02742 428 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 CUL1Q13616 776 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 SEPT14Q6ZU15 432 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 SEC14L1Q92503 715 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms