RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 SRGAP2CP0DJJ0 459 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 CIITAP33076 1130 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 MLH1P40692 756 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 RPS9P46781 194 aaKnown RBP12.48□□□□□ -0.41
CLPB-208ENST00000538021 SCNN1GP51170 649 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 NRLP54845 237 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 PPM1LQ5SGD2 360 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 LAIR1Q6GTX8 287 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 FUT10Q6P4F1 479 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 ZNF852Q6ZMS4 543 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 SMG8Q8ND04 991 aaKnown RBP12.48□□□□□ -0.41
CLPB-208ENST00000538021 CNNM3Q8NE01 707 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 ITFG1Q8TB96 612 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 RIT2Q99578 217 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 APOL6Q9BWW8 343 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 SEMA4GQ9NTN9 838 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 FNIP2Q9P278 1114 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 MRPS17Q9Y2R5 130 aaKnown RBP12.48□□□□□ -0.41
CLPB-208ENST00000538021 COL4A3BPQ9Y5P4 624 aa12.48□□□□□ -0.41
CLPB-208ENST00000538021 GOLGA8AA7E2F4 631 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 GOLGA8BA8MQT2 603 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 SLC27A2O14975 620 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 STBD1O95210 358 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 RETP07949 1114 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 HOXA11P31270 313 aaPredicted RBP12.47□□□□□ -0.41
CLPB-208ENST00000538021 CREMQ03060 361 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 DSC1Q08554 894 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 ADCY1Q08828 1119 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 PFKFB3Q16875 520 aaPredicted RBP12.47□□□□□ -0.41
CLPB-208ENST00000538021 PLA2G4FQ68DD2 849 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 PRSS55Q6UWB4 352 aaPredicted RBP12.47□□□□□ -0.41
CLPB-208ENST00000538021 PRR23CQ6ZRP0 262 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 CELF5Q8N6W0 485 aaKnown RBP12.47□□□□□ -0.41
CLPB-208ENST00000538021 RABGGTAQ92696 567 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 SLC5A5Q92911 643 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 CCDC136Q96JN2 1154 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 ZFP42Q96MM3 310 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 MBOAT7Q96N66 472 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
CLPB-208ENST00000538021 ZMYND12Q9H0C1 365 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 MINDY3Q9H8M7 445 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 SH2B1Q9NRF2 756 aaPredicted RBP12.47□□□□□ -0.41
CLPB-208ENST00000538021 HEBP1Q9NRV9 189 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 FBXW11Q9UKB1 542 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 BRPF3Q9ULD4 1205 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 NAP1L2Q9ULW6 460 aaPredicted RBP12.47□□□□□ -0.41
CLPB-208ENST00000538021 NDRG2Q9UN36 371 aaKnown RBP12.47□□□□□ -0.41
CLPB-208ENST00000538021 HES2Q9Y543 173 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 IPPQ9Y573 584 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 ATRXP46100 2492 aa12.47□□□□□ -0.41
CLPB-208ENST00000538021 GDF9O60383 454 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 XYLBO75191 536 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 TADA2AO75478 443 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 C8AP07357 584 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 HNRNPA1P09651 372 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLPB-208ENST00000538021 GNA11P29992 359 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 AAMPQ13685 434 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 PPP2R5DQ14738 602 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 IL31Q6EBC2 164 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 SRGAP1Q7Z6B7 1085 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 CCDC12Q8WUD4 166 aaPredicted RBP12.46□□□□□ -0.41
CLPB-208ENST00000538021 PRPF31Q8WWY3 499 aaKnown RBP12.46□□□□□ -0.41
CLPB-208ENST00000538021 ING5Q8WYH8 240 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 TMEM143Q96AN5 459 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 TCEANC2Q96MN5 208 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 EIF2AQ9BY44 585 aaKnown RBP12.46□□□□□ -0.41
CLPB-208ENST00000538021 ADAM28Q9UKQ2 775 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 FRYQ5TBA9 3013 aa12.46□□□□□ -0.41
CLPB-208ENST00000538021 ESYT2A0FGR8 921 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 LRP3O75074 770 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 ERLIN2O94905 339 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 CDC27P30260 824 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 FZD5Q13467 585 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 SIM2Q14190 667 aaPredicted RBP12.45□□□□□ -0.42
CLPB-208ENST00000538021 CSRP2Q16527 193 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 RTP2Q5QGT7 225 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 ANO5Q75V66 913 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 NPAS3Q8IXF0 933 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 GPR65Q8IYL9 337 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 RDM1Q8NG50 284 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 SLC7A3Q8WY07 619 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 DDX1Q92499 740 aaKnown RBP12.45□□□□□ -0.42
CLPB-208ENST00000538021 MCRS1Q96EZ8 462 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 BMP2KQ9NSY1 1161 aaPredicted RBP12.45□□□□□ -0.42
CLPB-208ENST00000538021 HCFC1R1Q9NWW0 138 aa12.45□□□□□ -0.42
CLPB-208ENST00000538021 TDRD15B5MCY1 1934 aaKnown RBP12.45□□□□□ -0.42
CLPB-208ENST00000538021 SF3B1O75533 1304 aaKnown RBP eCLIP12.44□□□□□ -0.424e-6■■■■■ 100.3
CLPB-208ENST00000538021 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 PSMD10O75832 226 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 TDGF1P13385 188 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 NPEPPSP55786 919 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 LAMTOR4Q0VGL1 99 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 PSMD5Q16401 504 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 PABPC1LQ4VXU2 614 aaKnown RBP12.44□□□□□ -0.42
CLPB-208ENST00000538021 N4BP2L1Q5TBK1 243 aaPredicted RBP12.44□□□□□ -0.42
CLPB-208ENST00000538021 NOTUMQ6P988 496 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.44□□□□□ -0.42
CLPB-208ENST00000538021 CEP57Q86XR8 500 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms