RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PTENP60484 403 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 DR1Q01658 176 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 KLHL30Q0D2K2 578 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 Q4G0T1 1027 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SH2D4BQ5SQS7 431 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SNX30Q5VWJ9 437 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 CIAPIN1Q6FI81 312 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 ZDHHC24Q6UX98 284 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 PEX26Q7Z412 305 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SLFN11Q7Z7L1 901 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 SEMA4AQ9H3S1 761 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 GOLPH3Q9H4A6 298 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 DNAJC18Q9H819 358 aa12.17□□□□□ -0.46
SEMA4D-221ENST00000537934 PP2D1A8MPX8 630 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 TRAFD1O14545 582 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 TMCC1O94876 653 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 OATP04181 439 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 ASIC1P78348 528 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 CCDC6Q16204 474 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 ZC3H18Q86VM9 953 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 KIAA0895Q8NCT3 520 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 TPCN2Q8NHX9 752 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 CEP95Q96GE4 821 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 NR1H4Q96RI1 486 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 TGS1Q96RS0 853 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 PLIN2Q99541 437 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 IQCGQ9H095 443 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 HAO1Q9UJM8 370 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 TCP10L2B9ZVM9 353 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 AKR1B1P15121 316 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 TARSP26639 723 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 SHMT1P34896 483 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 POLGP54098 1239 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 YARSP54577 528 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 DLGAP5Q15398 846 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 VSTM1Q6UX27 236 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 CEP128Q6ZU80 1094 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 DGKHQ86XP1 1220 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 PNMA1Q8ND90 353 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 NEDD1Q8NHV4 660 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 FBXO25Q8TCJ0 367 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 LRRC15Q8TF66 581 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 SLC7A6OSQ96CW6 309 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 MIS12Q9H081 205 aa12.16□□□□□ -0.46
SEMA4D-221ENST00000537934 MYH4Q9Y623 1939 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 PFDN1O60925 122 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 DDAH1O94760 285 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 HLA-DOAP06340 250 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 EPHB2P29323 1055 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 EIF6P56537 245 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 BPIFB4P59827 614 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 POLR2FP61218 127 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 USP46P62068 366 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 KIAA1755Q5JYT7 1200 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 MKL1Q969V6 931 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 ERP27Q96DN0 273 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 MAGEB18Q96M61 343 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 TMEM47Q9BQJ4 181 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 HDAC9Q9UKV0 1011 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 SCAF8Q9UPN6 1271 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 BZW2Q9Y6E2 419 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 ARFGEF1Q9Y6D6 1849 aa12.15□□□□□ -0.46
SEMA4D-221ENST00000537934 KIAA0391O15091 583 aaKnown RBP12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 RIPK2O43353 540 aa12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 EGFRP00533 1210 aa12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 CYP1A1P04798 512 aaPredicted RBP12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 RPL13P26373 211 aaKnown RBP12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 DHX34Q14147 1143 aaKnown RBP12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 GIT2Q14161 759 aa12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 ZC2HC1CQ53FD0 456 aaPredicted RBP12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 AGBL3Q8NEM8 1001 aa12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 NRG4Q8WWG1 115 aa12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 ARHGEF2Q92974 986 aaKnown RBP12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 TANGO6Q9C0B7 1094 aa12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 KIAA1683Q9H0B3 1180 aa12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 TLE6Q9H808 572 aa12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 TCP11L1Q9NUJ3 509 aa12.15□□□□□ -0.47
SEMA4D-221ENST00000537934 GNA14O95837 355 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 FGGP02679 453 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 MARK3P27448 753 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 ATP5DP30049 168 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 ASIC2Q16515 512 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 PTPROQ16827 1216 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 KHDC1Q4VXA5 237 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 SYCE1Q8N0S2 351 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 UHMK1Q8TAS1 419 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 HES6Q96HZ4 224 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 HIC2Q96JB3 615 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 LRRC37BQ96QE4 947 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 LTBP3Q9NS15 1303 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 MAPK13O15264 365 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 T-ENOLP0DO92 83 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 SESN3P58005 492 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 AMPD3Q01432 767 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 LRRC63Q05C16 580 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms