RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 IL17REQ8NFR9 667 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 OR6Y1Q8NGX8 325 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 ZNF398Q8TD17 642 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 USP6NLQ92738 828 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 SKA1Q96BD8 255 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 NSMCE3Q96MG7 304 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 SPZ1Q9BXG8 430 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 EBF3Q9H4W6 596 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 CCPG1Q9ULG6 757 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 DIS3Q9Y2L1 958 aaKnown RBP9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 WASF2Q9Y6W5 498 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 ZNF142P52746 1687 aaPredicted RBP9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 PGM3O95394 542 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 DDX58O95786 925 aaKnown RBP9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 GH1P01241 217 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 MYCLP1P12525 358 aaPredicted RBP9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 TKTP29401 623 aaKnown RBP9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 MSLNQ13421 630 aaPredicted RBP9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 MAN2A1Q16706 1144 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 PCNX4Q63HM2 1172 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 BORAQ6PGQ7 559 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 ANKRD35Q8N283 1001 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 TTC39CQ8N584 583 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 TTLL11Q8NHH1 800 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 PYROXD1Q8WU10 500 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 PPP1R10Q96QC0 940 aaKnown RBP9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 FAM217BQ9NTX9 383 aaPredicted RBP9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 PLK2Q9NYY3 685 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 COQ6Q9Y2Z9 468 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 ATP6V0A2Q9Y487 856 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 AK5Q9Y6K8 562 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 NUMBLQ9Y6R0 609 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 ABCB11O95342 1321 aa9.08□□□□□ -0.96
SRGAP1-202ENST00000537556 FUOMA2VDF0 154 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 PODXLO00592 558 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 C2CD2LO14523 706 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 EPHB6O15197 1021 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 KCNA2P16389 499 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 POLR2EP19388 210 aaKnown RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ENDOUP21128 410 aaKnown RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 LIFRP42702 1097 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 POLR2FP61218 127 aaKnown RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 PFKPQ01813 784 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 TMEM214Q6NUQ4 689 aaKnown RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 CLNKQ7Z7G1 428 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ERI1Q8IV48 349 aaKnown RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ALLCQ8N6M5 410 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 OSBP2Q969R2 916 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 NSL1Q96IY1 281 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 TBC1D23Q9NUY8 699 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 FBXO9Q9UK97 447 aaPredicted RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ASAP1Q9ULH1 1129 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 SNX24Q9Y343 169 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ACTL7BQ9Y614 415 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 KIAA0391O15091 583 aaKnown RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 CIB2O75838 187 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 BAG2O95816 211 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ZNF12P17014 697 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 PPARGP37231 505 aaPredicted RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 RXRGP48443 463 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ATP2C1P98194 919 aaPredicted RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 CYP4A11Q02928 519 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 PDK3Q15120 406 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 KYNUQ16719 465 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 TRMT5Q32P41 509 aaKnown RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 MMEL1Q495T6 779 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 FYB2Q5VWT5 728 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 SNRNP48Q6IEG0 339 aaKnown RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 PDSS2Q86YH6 399 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ZFP28Q8NHY6 868 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 DDI1Q8WTU0 396 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 EFHD2Q96C19 240 aaPredicted RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 LBHD1Q9BQE6 289 aaPredicted RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ARMCX3Q9UH62 379 aaPredicted RBP9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 ARHGAP23Q9P227 1491 aa9.07□□□□□ -0.96
SRGAP1-202ENST00000537556 NBPF26B4DH59 902 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 ADAM23O75077 832 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 FKBP6O75344 327 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 FGGP02679 453 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 VCLP18206 1134 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 FGFR4P22455 802 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 GUCY1A2P33402 732 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 BCAP31P51572 246 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 RAP1GDS1P52306 607 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 EIF4A1P60842 406 aaKnown RBP9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 LONRF1Q17RB8 773 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 TMEM67Q5HYA8 995 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 METTL21CQ5VZV1 264 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 ANKRD40Q6AI12 368 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 ZDHHC24Q6UX98 284 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 RGS9BPQ6ZS82 235 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 NLRP9Q7RTR0 991 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 NET1Q7Z628 596 aaPredicted RBP9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 ADGRG6Q86SQ4 1221 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 OXER1Q8TDS5 423 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 MRPS26Q9BYN8 205 aaKnown RBP9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 CEP72Q9P209 647 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 CASZ1Q86V15 1759 aa9.06□□□□□ -0.96
SRGAP1-202ENST00000537556 DDX60Q8IY21 1712 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms