RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 CYP4F11Q9HBI6 524 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 PFASO15067 1338 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 POTEB3A0JP26 581 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 CCDC159P0C7I6 412 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 GPS1Q13098 491 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 KRT72Q14CN4 511 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 STXBP2Q15833 593 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 FASTKD1Q53R41 847 aaKnown RBP11.26□□□□□ -0.61
CLIP1-209ENST00000537178 THEMIS2Q5TEJ8 643 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 TWF2Q6IBS0 349 aaKnown RBP11.26□□□□□ -0.61
CLIP1-209ENST00000537178 POTEBQ6S5H4 581 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 PADI6Q6TGC4 694 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 ENOSF1Q7L5Y1 443 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 COG1Q8WTW3 980 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 DCAF4Q8WV16 495 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 DYNLL2Q96FJ2 89 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLIP1-209ENST00000537178 OSBPL1AQ9BXW6 950 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 C2orf40Q9H1Z8 148 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 SLC9A2Q9UBY0 812 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 SATB2Q9UPW6 733 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 ZBTB1Q9Y2K1 713 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 LRRC53A6NM62 1247 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 SFI1A8K8P3 1242 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 GGPS1O95749 300 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 GGCXP38435 758 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 RAD23BP54727 409 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 KCNH2Q12809 1159 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 NAA30Q147X3 362 aaPredicted RBP11.26□□□□□ -0.61
CLIP1-209ENST00000537178 TRADDQ15628 312 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
CLIP1-209ENST00000537178 SP110Q9HB58 689 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 ZNF229Q9UJW7 825 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 MRFAP1Q9Y605 127 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 STAT3P40763 770 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 PRELPP51888 382 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 VCPP55072 806 aaKnown RBP11.26□□□□□ -0.61
CLIP1-209ENST00000537178 MRPS25P82663 173 aaKnown RBP11.26□□□□□ -0.61
CLIP1-209ENST00000537178 ROR1Q01973 937 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 ORC2Q13416 577 aaPredicted RBP11.26□□□□□ -0.61
CLIP1-209ENST00000537178 LRRC8EQ6NSJ5 796 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 PLEKHM3Q6ZWE6 761 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 KIAA2013Q8IYS2 634 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 PIGOQ8TEQ8 1089 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 WNT8AQ9H1J5 351 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 PKD2L2Q9NZM6 624 aa11.26□□□□□ -0.61
CLIP1-209ENST00000537178 CFAP69A5D8W1 941 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 MTMR1Q13613 665 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 INPP5AQ14642 412 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 FAM83BQ5T0W9 1011 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 ANKS3Q6ZW76 656 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 NLRP14Q86W24 1093 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 DDIASQ8IXT1 998 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 TTC30BQ8N4P2 665 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 SEC31BQ9NQW1 1179 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 NDFIP2Q9NV92 336 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 TMEM51Q9NW97 253 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 PCSK1NQ9UHG2 260 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 DIP2BQ9P265 1576 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 CCDC195A0A1B0GUA6 201 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 TARSL2A2RTX5 802 aaKnown RBP11.25□□□□□ -0.61
CLIP1-209ENST00000537178 KRT87PA6NCN2 255 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 C16orf96A6NNT2 1141 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 KRT14P02533 472 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 SLC27A3Q5K4L6 730 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 PASD1Q8IV76 773 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 EFHBQ8N7U6 833 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 KCNV2Q8TDN2 545 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 THAP11Q96EK4 314 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 SLC10A4Q96EP9 437 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 SNF8Q96H20 258 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 NUP85Q9BW27 656 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 BRIP1Q9BX63 1249 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 EML4Q9HC35 981 aaKnown RBP11.25□□□□□ -0.61
CLIP1-209ENST00000537178 UBA6A0AVT1 1052 aaPredicted RBP11.25□□□□□ -0.61
CLIP1-209ENST00000537178 RASSF10A6NK89 507 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 GPC3P51654 580 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 MRPL28Q13084 256 aaKnown RBP11.25□□□□□ -0.61
CLIP1-209ENST00000537178 MTHFD1LQ6UB35 978 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 ZBED8Q8IZ13 594 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 RAB42Q8N4Z0 105 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 PBXIP1Q96AQ6 731 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 ABHD8Q96I13 439 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 ATP6V1G3Q96LB4 118 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 SPON2Q9BUD6 331 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 PALMDQ9NP74 551 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 LTN1O94822 1766 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 UBN2Q6ZU65 1347 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 M0QYV0 167 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 FOXP2O15409 715 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 HNRNPRO43390 633 aaKnown RBP11.25□□□□□ -0.61
CLIP1-209ENST00000537178 SEMA3FQ13275 785 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 DMC1Q14565 340 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 SCFD1Q8WVM8 642 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 OSBPL9Q96SU4 736 aa11.25□□□□□ -0.61
CLIP1-209ENST00000537178 FAM167BQ9BTA0 163 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms