RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SETD4Q9NVD3 440 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 HDAC6Q9UBN7 1215 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TFR2Q9UP52 801 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 Q9Y3F1 56 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 JRKLQ9Y4A0 524 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PCDHA13Q9Y5I0 950 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MKI67P46013 3256 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 IGKV6-21A0A0C4DH24 114 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 LRRIQ4A6NIV6 560 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 EIF3DO15371 548 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TGFB1I1O43294 461 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 EDN1P05305 212 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SMIM10L2AP0DMW4 78 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SMIM10L2BP0DMW5 78 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 GRK4P32298 578 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ARL2P36404 184 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 KIF11P52732 1056 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 KCNMA1Q12791 1236 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 KNOP1Q1ED39 458 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 GNASQ5JWF2 1037 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TAS1R3Q7RTX0 852 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PXYLP1Q8TE99 480 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 UPF3AQ9H1J1 476 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 VIPAS39Q9H9C1 493 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 KMT5AQ9NQR1 393 aa14.07□□□□□ -0.16
CDK5RAP3-202ENST00000536708 DENND3A2RUS2 1198 aa14.06□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TACC1O75410 805 aa14.06□□□□□ -0.16
CDK5RAP3-202ENST00000536708 KLRC1P26715 233 aa14.06□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PSEN2P49810 448 aa14.06□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CYP27A1Q02318 531 aa14.06□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SLAIN1Q8ND83 568 aa14.06□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PRPF31Q8WWY3 499 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-202ENST00000536708 FAM207AQ9NSI2 230 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-202ENST00000536708 DUSP10Q9Y6W6 482 aa14.06□□□□□ -0.16
CDK5RAP3-202ENST00000536708 LRRC53A6NM62 1247 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 H3BQF6 201 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CLIC2O15247 247 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PLEKP08567 350 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 EIF4A3P38919 411 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ZNF200P98182 395 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CASP8Q14790 479 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 IQCEQ6IPM2 695 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 EFCAB12Q6NXP0 572 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PPP4R3CPQ6ZMV5 832 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TRIM59Q8IWR1 403 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RUBCNQ92622 972 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 EXOC4Q96A65 974 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 IFIH1Q9BYX4 1025 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CEP72Q9P209 647 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 DDX20Q9UHI6 824 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 FEZ2Q9UHY8 353 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SNX12Q9UMY4 172 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 COL1A2P08123 1366 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 HAS3O00219 553 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MAPTP10636 758 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RTP1P59025 263 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 EDRF1Q3B7T1 1238 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ZNF484Q5JVG2 852 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 HGSNATQ68CP4 663 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MTHFD1LQ6UB35 978 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RRAGAQ7L523 313 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RHPN2Q8IUC4 686 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 LINC01465Q8N7H1 131 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 IFT74Q96LB3 600 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 NLRP4Q96MN2 994 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ARHGAP28Q9P2N2 729 aa14.05□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SRGAP2O75044 1071 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 VTNP04004 478 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 NR2F2P24468 414 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 GTF2BQ00403 316 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 LAMTOR4Q0VGL1 99 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MAP9Q49MG5 647 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 BRDTQ58F21 947 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MMGT1Q8N4V1 131 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RNF10Q8N5U6 811 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ZSWIM2Q8NEG5 633 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SPIRE2Q8WWL2 714 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PSPC1Q8WXF1 523 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PDE11AQ9HCR9 933 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SUCLA2Q9P2R7 463 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 UBE4BO95155 1302 aa14.04□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TTLL13PA6NNM8 815 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 AKR1B10O60218 316 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CSDE1O75534 798 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 NOL4O94818 638 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ASGR1P07306 291 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SRGAP2CP0DJJ0 459 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MAGEA1P43355 309 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SMTNP53814 917 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SLC39A4Q6P5W5 647 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RUFY4Q6ZNE9 571 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CREG2Q8IUH2 290 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MAP4K3Q8IVH8 894 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SYCP3Q8IZU3 236 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CCDC155Q8N6L0 562 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 RNF149Q8NC42 400 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 FAM49AQ9H0Q0 323 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms