RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 PHF20L1A8MW92 1017 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 GRXCR1A8MXD5 290 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 KLRF2D3W0D1 207 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 SMIM22K7EJ46 135 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 RGS16O15492 202 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 ATP2C2O75185 946 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 RTN2O75298 545 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 WFS1O76024 890 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 AFPP02771 609 aaKnown RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 ALADP13716 330 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 CHN1P15882 459 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 ATP5DP30049 168 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 MMP13P45452 471 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 PDE6CP51160 858 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 PMS2P54278 862 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 RNASE9P60153 205 aaKnown RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 PTENP60484 403 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 GSTO1P78417 241 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 MECOMQ03112 1051 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 NFIAQ12857 509 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 PPP2R5AQ15172 486 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 TRIM60Q495X7 471 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 CCDC38Q502W7 563 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 C12orf60Q5U649 245 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 FKBP1CQ5VVH2 108 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 ALKBH5Q6P6C2 394 aaKnown RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 TRPM8Q7Z2W7 1104 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 ZFPM1Q8IX07 1006 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 ARMC2Q8NEN0 867 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 HPS3Q969F9 1004 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 FAXDC2Q96IV6 333 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 ZDHHC15Q96MV8 337 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 ZNF317Q96PQ6 595 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 TXLNGYQ9BZA5 131 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 DDX47Q9H0S4 455 aaKnown RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 NEUROG2Q9H2A3 272 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 PABPC3Q9H361 631 aaKnown RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 METTL14Q9HCE5 456 aaKnown RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 POLD4Q9HCU8 107 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 PDLIM7Q9NR12 457 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 INTS9Q9NV88 658 aaKnown RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 MCM9Q9NXL9 1143 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 NAGPAQ9UK23 515 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 PACSIN2Q9UNF0 486 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-216ENST00000536548 AGTPBP1Q9UPW5 1226 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 STK24Q9Y6E0 443 aa8.38□□□□□ -1.07
CPSF7-216ENST00000536548 NCANO14594 1321 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 CCDC189A1A4V9 331 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 O00370 1275 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 PODXLO00592 558 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 TTI1O43156 1089 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 CALUO43852 315 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 MARCH6O60337 910 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 SUN1O94901 812 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 GGPS1O95749 300 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 CYP2D6P10635 497 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 NQO1P15559 274 aaKnown RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 ADCY7P51828 1080 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 DR1Q01658 176 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 NHLH1Q02575 133 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 ARID5AQ03989 594 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 PTK2Q05397 1052 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 ZNF268Q14587 947 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 TRADDQ15628 312 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 HYIQ5T013 277 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 GJC2Q5T442 439 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 SLC39A5Q6ZMH5 540 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 FBXO33Q7Z6M2 555 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 NT5DC3Q86UY8 548 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 DDX42Q86XP3 938 aaKnown RBP eCLIP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 DZIP1Q86YF9 867 aaKnown RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 SCYL3Q8IZE3 742 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 TEX9Q8N6V9 391 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 FAM151AQ8WW52 585 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 TCP11Q8WWU5 503 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 HES6Q96HZ4 224 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 FAM84BQ96KN1 310 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 ERP44Q9BS26 406 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 AP1M1Q9BXS5 423 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 PACSIN1Q9BY11 444 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 ROPN1BQ9BZX4 212 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 TRIM7Q9C029 511 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 CARD9Q9H257 536 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 DPH5Q9H2P9 285 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 ROPN1Q9HAT0 212 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 PICK1Q9NRD5 415 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 CXXC1Q9P0U4 656 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-216ENST00000536548 AMACRQ9UHK6 382 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 PNMA2Q9UL42 364 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 NENFQ9UMX5 172 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 TRPC6Q9Y210 931 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 ATP8A1Q9Y2Q0 1164 aa8.37□□□□□ -1.07
CPSF7-216ENST00000536548 MIF4GDA9UHW6 222 aaKnown RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 SLC16A3O15427 465 aaKnown RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 CYTH3O43739 400 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 BAG3O95817 575 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 LDHCP07864 332 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 VIMP08670 466 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms