RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 SNX21Q969T3 373 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 CCDC51Q96ER9 411 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 KLHL5Q96PQ7 755 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
PRKDC-207ENST00000536483 USTQ9Y2C2 406 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 INPPL1O15357 1258 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 SLC26A4O43511 780 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
PRKDC-207ENST00000536483 ALDH2P05091 517 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 SSBP05455 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRKDC-207ENST00000536483 CNPP09543 421 aaKnown RBP13.78□□□□□ -0.2
PRKDC-207ENST00000536483 KLRC2P26717 231 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 MBTD1Q05BQ5 628 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 CAPSQ13938 189 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 AMHR2Q16671 573 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 FAM187BQ17R55 369 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 UBXN11Q5T124 520 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
PRKDC-207ENST00000536483 MCTP1Q6DN14 999 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 POTEGQ6S5H5 508 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 PADI6Q6TGC4 694 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 DTHD1Q6ZMT9 781 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 PPFIBP1Q86W92 1011 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 URGCPQ8TCY9 931 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
PRKDC-207ENST00000536483 EMILIN2Q9BXX0 1053 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 RSAD1Q9HA92 442 aa13.78□□□□□ -0.2
PRKDC-207ENST00000536483 A0A087WWV3 80 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 TSPAN1O60635 241 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 BMP15O95972 392 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 POMCP01189 267 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 PTPRZ1P23471 2315 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-207ENST00000536483 CCT6AP40227 531 aaKnown RBP13.77□□□□□ -0.21
PRKDC-207ENST00000536483 CLCN4P51793 760 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 GPR149Q86SP6 731 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 CNNM3Q8NE01 707 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 PRIMPOLQ96LW4 560 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 FAM193BQ96PV7 902 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-207ENST00000536483 TMEM175Q9BSA9 504 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 FZD8Q9H461 694 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 SFXN1Q9H9B4 322 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 KANSL3Q9P2N6 904 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 FAN1Q9Y2M0 1017 aa13.77□□□□□ -0.21
PRKDC-207ENST00000536483 MORC2Q9Y6X9 1032 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-207ENST00000536483 CNTNAP2Q9UHC6 1331 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 A0A1B0GUA9 196 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 NRP1O14786 923 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 USO1O60763 962 aaKnown RBP13.76□□□□□ -0.21
PRKDC-207ENST00000536483 LILRB3O75022 631 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
PRKDC-207ENST00000536483 KRT79Q5XKE5 535 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 ASTLQ6HA08 431 aaPredicted RBP13.76□□□□□ -0.21
PRKDC-207ENST00000536483 CCDC149Q6ZUS6 474 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 ACSF2Q96CM8 615 aaPredicted RBP13.76□□□□□ -0.21
PRKDC-207ENST00000536483 AK8Q96MA6 479 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 CCDC43Q96MW1 224 aaKnown RBP13.76□□□□□ -0.21
PRKDC-207ENST00000536483 POLR3FQ9H1D9 316 aaPredicted RBP13.76□□□□□ -0.21
PRKDC-207ENST00000536483 MFSD1Q9H3U5 465 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 UBN1Q9NPG3 1134 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
PRKDC-207ENST00000536483 STK39Q9UEW8 545 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 KIAA1024Q9UPX6 916 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 ARID2Q68CP9 1835 aa13.76□□□□□ -0.21
PRKDC-207ENST00000536483 ZMYM2Q9UBW7 1377 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 ARHGEF35A5YM69 484 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 K7ELQ4 463 aaPredicted RBP13.75□□□□□ -0.21
PRKDC-207ENST00000536483 C2CD2LO14523 706 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 NCBP1Q09161 790 aaKnown RBP13.75□□□□□ -0.21
PRKDC-207ENST00000536483 NOTUMQ6P988 496 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 OTOP3Q7RTS5 596 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 TAS1R1Q7RTX1 841 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
PRKDC-207ENST00000536483 FLCNQ8NFG4 579 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 KIFAP3Q92845 792 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 BHMT2Q9H2M3 363 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 GPRC5CQ9NQ84 441 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 DDX19AQ9NUU7 478 aaKnown RBP13.75□□□□□ -0.21
PRKDC-207ENST00000536483 MARCH5Q9NX47 278 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 PRG3Q9Y2Y8 225 aaPredicted RBP13.75□□□□□ -0.21
PRKDC-207ENST00000536483 VPS13AQ96RL7 3174 aa13.75□□□□□ -0.21
PRKDC-207ENST00000536483 PROB1E7EW31 1015 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 INO80B-WBP1J3KQ70 363 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 ERLIN2O94905 339 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 SOD2P04179 222 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 URODP06132 367 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 MYBP10242 640 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 ITGA4P13612 1032 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 ARF4P18085 180 aaPredicted RBP13.74□□□□□ -0.21
PRKDC-207ENST00000536483 SYT1P21579 422 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 NAMPTP43490 491 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 OR1G1P47890 313 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms