RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 SEPT9Q9UHD8 586 aaPredicted RBP5.88□□□□□ -1.47
CHD4-205ENST00000536301 FBXW11Q9UKB1 542 aa5.88□□□□□ -1.47
CHD4-205ENST00000536301 ZMIZ1Q9ULJ6 1067 aa5.88□□□□□ -1.47
CHD4-205ENST00000536301 SAMM50Q9Y512 469 aa5.88□□□□□ -1.47
CHD4-205ENST00000536301 NCANO14594 1321 aa5.88□□□□□ -1.47
CHD4-205ENST00000536301 LOC400499M0QZD8 3231 aa5.88□□□□□ -1.47
CHD4-205ENST00000536301 DSPP15924 2871 aaKnown RBP5.88□□□□□ -1.47
CHD4-205ENST00000536301 KIF26AQ9ULI4 1882 aaPredicted RBP5.88□□□□□ -1.47
CHD4-205ENST00000536301 PCNX2A6NKB5 2137 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 ABCA7Q8IZY2 2146 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 FLNBO75369 2602 aaKnown RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 CCDC69A6NI79 296 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 MSH4O15457 936 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 ZIC2O95409 532 aaPredicted RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 FOSP01100 380 aaPredicted RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 RETP07949 1114 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 CYP3A4P08684 503 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 CALM1P0DP23 149 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 CALM2P0DP24 149 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 CALM3P0DP25 149 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 SFPQP23246 707 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHD4-205ENST00000536301 MLH1P40692 756 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 RAB27AP51159 221 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 SHC2P98077 582 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 NUCB1Q02818 461 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 AP3B2Q13367 1082 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 GRM2Q14416 872 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 SLC5A9Q2M3M2 681 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 TANGO2Q6ICL3 276 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 SMAP1Q8IYB5 467 aaPredicted RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 FANCBQ8NB91 859 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 GSTCDQ8NEC7 633 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 HASPINQ8TF76 798 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 HDAC7Q8WUI4 952 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 MCRS1Q96EZ8 462 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 FAM167AQ96KS9 214 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 TCEANC2Q96MN5 208 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 CLSTN3Q9BQT9 956 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 PHF20Q9BVI0 1012 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 APOL6Q9BWW8 343 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 TMEM121BQ9BXQ6 578 aaPredicted RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 CXCL16Q9H2A7 254 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 CHRDQ9H2X0 955 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 PLEKHA4Q9H4M7 779 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 DISC1Q9NRI5 854 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 NRBP2Q9NSY0 501 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 BMP2KQ9NSY1 1161 aaPredicted RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 RBM12Q9NTZ6 932 aaKnown RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 DNMT3BQ9UBC3 853 aaKnown RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 POLIQ9UNA4 740 aa5.87□□□□□ -1.47
CHD4-205ENST00000536301 RBM8AQ9Y5S9 174 aaKnown RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 V9GY48 417 aaPredicted RBP5.87□□□□□ -1.47
CHD4-205ENST00000536301 ARID2Q68CP9 1835 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 CNTNAP2Q9UHC6 1331 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 ARL5CA6NH57 179 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 WDR64B1ANS9 1081 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 K7ESF4 209 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 GIPC1O14908 333 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 C8AP07357 584 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 SKIP12755 728 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 CEBPBP17676 345 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 FCARP24071 287 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 CHMLP26374 656 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 CDC27P30260 824 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 MAGEA9P43362 315 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 RPS9P46781 194 aaKnown RBP5.86□□□□□ -1.47
CHD4-205ENST00000536301 NPEPPSP55786 919 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 ADCY1Q08828 1119 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 SIM2Q14190 667 aaPredicted RBP5.86□□□□□ -1.47
CHD4-205ENST00000536301 CSRP2Q16527 193 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 HEATR6Q6AI08 1181 aaKnown RBP5.86□□□□□ -1.47
CHD4-205ENST00000536301 PPP1R18Q6NYC8 613 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 CASC1Q6TDU7 716 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 UNQ6494/PRO21346Q6UXR6 183 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 RSPO2Q6UXX9 243 aaPredicted RBP5.86□□□□□ -1.47
CHD4-205ENST00000536301 Q6ZS52 159 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 MTSS1LQ765P7 747 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 ZNF410Q86VK4 478 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 CDR2LQ86X02 465 aaPredicted RBP5.86□□□□□ -1.47
CHD4-205ENST00000536301 FAM160A2Q8N612 972 aaPredicted RBP5.86□□□□□ -1.47
CHD4-205ENST00000536301 CELF5Q8N6W0 485 aaKnown RBP5.86□□□□□ -1.47
CHD4-205ENST00000536301 EXOC6Q8TAG9 804 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 TMEM143Q96AN5 459 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 PGBD4Q96DM1 585 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 TCEAL4Q96EI5 215 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 CPB2Q96IY4 423 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 NIFKQ9BYG3 293 aaKnown RBP5.86□□□□□ -1.47
CHD4-205ENST00000536301 NXF3Q9H4D5 531 aaKnown RBP5.86□□□□□ -1.47
CHD4-205ENST00000536301 LMAN1LQ9HAT1 526 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 TBC1D22BQ9NU19 505 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 BARHL2Q9NY43 387 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 KLK14Q9P0G3 267 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 FNIP2Q9P278 1114 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 RAB23Q9ULC3 237 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 BRPF3Q9ULD4 1205 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 IPPQ9Y573 584 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 SLC12A7Q9Y666 1083 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 BPTFQ12830 3046 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 NBEAQ8NFP9 2946 aa5.86□□□□□ -1.47
CHD4-205ENST00000536301 NUP205Q92621 2012 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms