RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 HMGB1P1B2RPK0 211 aaPredicted RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 H0YGN5 161 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 CCDC188H7C350 402 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 MEIS2O14770 477 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 GPR182O15218 404 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 RAD51CO43502 376 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 MARCH6O60337 910 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 MICAL2O94851 1124 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 FOSP01100 380 aaPredicted RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 IGHA2P01877 340 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 AFPP02771 609 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 RPLP1P05386 114 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SSBP05455 408 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 HLA-DOAP06340 250 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 CYP3A4P08684 503 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 GYS1P13807 737 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 UCHL3P15374 230 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SLC9A1P19634 815 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 ATP4AP20648 1035 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 NR2F2P24468 414 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 ECHS1P30084 290 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SREBF1P36956 1147 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 CCT5P48643 541 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 NAP1L1P55209 391 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 MRPS25P82663 173 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 GUCY2DQ02846 1103 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 CUL1Q13616 776 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 DSC3Q14574 896 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SLC15A2Q16348 729 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 TTC31Q49AM3 519 aaPredicted RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SPDYCQ5MJ68 293 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 IER5Q5VY09 327 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 APOBEC3HQ6NTF7 200 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 LINC00114Q6XXX2 140 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 CD163Q86VB7 1156 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SFR1Q86XK3 245 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 CATSPER3Q86XQ3 398 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 NT5DC4Q86YG4 428 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 CLEC10AQ8IUN9 316 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SUGP1Q8IWZ8 645 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 CERS5Q8N5B7 392 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 METTL13Q8N6R0 699 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 FAM133AQ8N9E0 248 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 TTC16Q8NEE8 873 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SLC30A5Q8TAD4 765 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 ERMNQ8TAM6 284 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 BCAS4Q8TDM0 211 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 GPR152Q8TDT2 470 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SEC14L1Q92503 715 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 TAF4BQ92750 862 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 GJA10Q969M2 543 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 LENG9Q96B70 501 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 ZBTB9Q96C00 473 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 ATP6V1G3Q96LB4 118 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 RNPC3Q96LT9 517 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 FAM20AQ96MK3 541 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 RUFY1Q96T51 708 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 KRT12Q99456 494 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 P2RX7Q99572 595 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SYT11Q9BT88 431 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 POLR3CQ9BUI4 534 aaPredicted RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 TAF1DQ9H5J8 278 aaPredicted RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 NEUROD4Q9HD90 331 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 TYW1Q9NV66 732 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 USP40Q9NVE5 1235 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 TBC1D7Q9P0N9 293 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 PRKAG2Q9UGJ0 569 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 ARMCX3Q9UH62 379 aaPredicted RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 ADAMTS1Q9UHI8 967 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 NAGPAQ9UK23 515 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 TTC7AQ9ULT0 858 aaPredicted RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 NFU1Q9UMS0 254 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 DIS3Q9Y2L1 958 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 TMA7Q9Y2S6 64 aaKnown RBP6.23□□□□□ -1.41
VPS33A-203ENST00000536212 DAAM1Q9Y4D1 1078 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 NFS1Q9Y697 457 aa6.23□□□□□ -1.41
VPS33A-203ENST00000536212 SHTN1A0MZ66 631 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 ZSCAN5CA6NGD5 496 aaPredicted RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 DDX3XO00571 662 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 EIF3DO15371 548 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 FLOT1O75955 427 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 AKAP3O75969 853 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 EYA4O95677 639 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 NR3C1P04150 777 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 H2AFZP0C0S5 128 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 ACTN1P12814 892 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 FERP16591 822 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 HOXB4P17483 251 aaPredicted RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 GAP43P17677 238 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 RPL13P26373 211 aaKnown RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 LSP1P33241 339 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 SLC16A2P36021 539 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 STAT3P40763 770 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 MAPK8P45983 427 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 CASP5P51878 434 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 EIF6P56537 245 aaKnown RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 FKBP1AP62942 108 aaKnown RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 POU5F1Q01860 360 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms