RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 ANO9A1A5B4 782 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 BHMG1C9JSJ3 638 aaPredicted RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 HBP1O60381 514 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 CYLC1P35663 651 aaPredicted RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 EIF4A3P38919 411 aaKnown RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 NOP2P46087 812 aaKnown RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 KRT83P78385 493 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 TTLL12Q14166 644 aaPredicted RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 SLFN11Q7Z7L1 901 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 EGFL6Q8IUX8 553 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 FAM71AQ8IYT1 594 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 GPD1LQ8N335 351 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 LNX1Q8TBB1 728 aaPredicted RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 DDX1Q92499 740 aaKnown RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 SEMA4DQ92854 862 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 JAKMIP2Q96AA8 810 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 ACO2Q99798 780 aaKnown RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 TINF2Q9BSI4 451 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 TSGA10Q9BZW7 698 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 NRBP2Q9NSY0 501 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 NOCTQ9UK39 431 aaKnown RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 FRMD4BQ9Y2L6 1034 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 PCDHA13Q9Y5I0 950 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 KIF3CO14782 793 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 GH1P01241 217 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 SOX5P35711 763 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 DNAJC21Q5F1R6 531 aaKnown RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 SFMBT2Q5VUG0 894 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 RGMBQ6NW40 437 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 RRAGAQ7L523 313 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 CBWD2Q8IUF1 395 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 LRRN4CLQ8ND94 238 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 TCP11Q8WWU5 503 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 SHC3Q92529 594 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 FAM212AQ96EL1 285 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 FAXDC2Q96IV6 333 aa8.68□□□□□ -1.02
COL21A1-212ENST00000535941 ZNHIT6Q9NWK9 470 aaKnown RBP8.68□□□□□ -1.02
COL21A1-212ENST00000535941 TADA3O75528 432 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 VNN1O95497 513 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 F2P00734 622 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 IQCF3P0C7M6 154 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 POLR2FP61218 127 aaKnown RBP8.67□□□□□ -1.02
COL21A1-212ENST00000535941 MYL7Q01449 175 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 MXD4Q14582 209 aaPredicted RBP8.67□□□□□ -1.02
COL21A1-212ENST00000535941 MTERF2Q49AM1 385 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ARHGEF19Q8IW93 802 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 RNF10Q8N5U6 811 aaKnown RBP8.67□□□□□ -1.02
COL21A1-212ENST00000535941 KAT2BQ92831 832 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 IRX2Q9BZI1 471 aaPredicted RBP8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ABHD16BQ9H3Z7 469 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 RNPEPQ9H4A4 650 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 FAM53CQ9NYF3 392 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.67□□□□□ -1.02
COL21A1-212ENST00000535941 TRIM10Q9UDY6 481 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 TXNP10599 105 aaKnown RBP8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ZNF132P52740 706 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 EFNA5P52803 228 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 PTENP60484 403 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 PTK2Q05397 1052 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 LAMTOR4Q0VGL1 99 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 NAB2Q15742 525 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ZACNQ401N2 412 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 LRRC57Q8N9N7 239 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 KREMEN1Q96MU8 473 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 SPATA33Q96N06 139 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ERAP1Q9NZ08 941 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 CPSF3Q9UKF6 684 aaKnown RBP8.67□□□□□ -1.02
COL21A1-212ENST00000535941 STXBP5LQ9Y2K9 1186 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 CES2O00748 559 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 PPFIA4O75335 1185 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 MTA2O94776 668 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 TRIM49P0CI25 452 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 TRIM49CP0CI26 452 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 POLGP54098 1239 aaPredicted RBP8.67□□□□□ -1.02
COL21A1-212ENST00000535941 GCNT1Q02742 428 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ITIH3Q06033 890 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ZSCAN26Q16670 478 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 FMNL3Q8IVF7 1028 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 TMEM143Q96AN5 459 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ERO1AQ96HE7 468 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 ABCB6Q9NP58 842 aa8.67□□□□□ -1.02
COL21A1-212ENST00000535941 DDX3XO00571 662 aaKnown RBP eCLIP8.66□□□□□ -1.02
COL21A1-212ENST00000535941 ASAP2O43150 1006 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 ACO1P21399 889 aaKnown RBP8.66□□□□□ -1.02
COL21A1-212ENST00000535941 CYP2J2P51589 502 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 ACVR2BQ13705 512 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
COL21A1-212ENST00000535941 CGRRF1Q99675 332 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 JPH2Q9BR39 696 aaPredicted RBP8.66□□□□□ -1.02
COL21A1-212ENST00000535941 ADAMTS10Q9H324 1103 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 ZHX3Q9H4I2 956 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 MMRN2Q9H8L6 949 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 JRKLQ9Y4A0 524 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 LTBP2Q14767 1821 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 HTTP42858 3142 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 A0A087X0T9 212 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 LRRN2O75325 713 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 FAM228BP0C875 321 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms