RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 OPA1O60313 960 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 EMC2Q15006 297 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 LRRC31Q6UY01 552 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 NOP9Q86U38 636 aaKnown RBP14.43□□□□□ -0.1
VPS33B-202ENST00000535906 KLHL7Q8IXQ5 586 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 TSEN2Q8NCE0 465 aaKnown RBP14.43□□□□□ -0.1
VPS33B-202ENST00000535906 HELQQ8TDG4 1101 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 TMC2Q8TDI7 906 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 EPS8L1Q8TE68 723 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 SCFD2Q8WU76 684 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 TMEM143Q96AN5 459 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 BICD1Q96G01 975 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 FAM84AQ96KN4 292 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 EPB41L5Q9HCM4 733 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 ZNF302Q9NR11 478 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 IRF6O14896 467 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 CYP26A1O43174 497 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 SHOX2O60902 331 aaPredicted RBP14.43□□□□□ -0.1
VPS33B-202ENST00000535906 CLSTN1O94985 981 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 FTLP02792 175 aaPredicted RBP14.43□□□□□ -0.1
VPS33B-202ENST00000535906 DLATP10515 647 aaKnown RBP14.43□□□□□ -0.1
VPS33B-202ENST00000535906 CHRNB2P17787 502 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 CARSP49589 748 aaKnown RBP14.43□□□□□ -0.1
VPS33B-202ENST00000535906 GPC3P51654 580 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 POLGP54098 1239 aaPredicted RBP14.43□□□□□ -0.1
VPS33B-202ENST00000535906 GUCY2DQ02846 1103 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 PRPF4BQ13523 1007 aaKnown RBP14.43□□□□□ -0.1
VPS33B-202ENST00000535906 SV2AQ7L0J3 742 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 SLC47A2Q86VL8 602 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 RIOX2Q8IUF8 465 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 GPD1LQ8N335 351 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 FBXL13Q8NEE6 735 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 PCDHB18PQ96TA0 734 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 FAM213AQ9BRX8 229 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 AP1M1Q9BXS5 423 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 ISCUQ9H1K1 167 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 R3HDMLQ9H3Y0 253 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 NOCTQ9UK39 431 aaKnown RBP14.43□□□□□ -0.1
VPS33B-202ENST00000535906 AMFRQ9UKV5 643 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 CSADQ9Y600 493 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 OTOFQ9HC10 1997 aa14.43□□□□□ -0.1
VPS33B-202ENST00000535906 RAD51CO43502 376 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 HSF2BPO75031 334 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 OATP04181 439 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 GARTP22102 1010 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 MFAP3P55082 362 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 TNNC1P63316 161 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 PPFIA1Q13136 1202 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 PAK2Q13177 524 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 TRADDQ15628 312 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 GADL1Q6ZQY3 521 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 SHC3Q92529 594 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.42□□□□□ -0.13e-6■■■□□ 18.7
VPS33B-202ENST00000535906 ADARB2Q9NS39 739 aaKnown RBP14.42□□□□□ -0.1
VPS33B-202ENST00000535906 RAB20Q9NX57 234 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 NOC2LQ9Y3T9 749 aaKnown RBP14.42□□□□□ -0.1
VPS33B-202ENST00000535906 SOWAHBA6NEL2 793 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 PGRMC1O00264 195 aaKnown RBP14.42□□□□□ -0.1
VPS33B-202ENST00000535906 UBA1P22314 1058 aaKnown RBP14.42□□□□□ -0.1
VPS33B-202ENST00000535906 NCAPG2Q86XI2 1143 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 RASGEF1CQ8N431 466 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 DCPSQ96C86 337 aaKnown RBP14.42□□□□□ -0.1
VPS33B-202ENST00000535906 SPATC1LQ9H0A9 340 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 DHX33Q9H6R0 707 aaKnown RBP14.42□□□□□ -0.1
VPS33B-202ENST00000535906 NFU1Q9UMS0 254 aa14.42□□□□□ -0.1
VPS33B-202ENST00000535906 PAPPA2Q9BXP8 1791 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 IGKV6D-21A0A0A0MT36 114 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 SULF1Q8IWU6 871 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 ASAP3Q8TDY4 903 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 IFT81Q8WYA0 676 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 TATDN2Q93075 761 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 CEP89Q96ST8 783 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 RUFY1Q96T51 708 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 PCYT2Q99447 389 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 ELP3Q9H9T3 547 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 FBXO40Q9UH90 709 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 CHORDC1Q9UHD1 332 aaPredicted RBP14.41□□□□□ -0.1
VPS33B-202ENST00000535906 A0A0G2JMZ2 1700 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 GSTTP1A0A1W2PQM5 241 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 DDX3YO15523 660 aaKnown RBP14.41□□□□□ -0.1
VPS33B-202ENST00000535906 FARP2O94887 1054 aaPredicted RBP14.41□□□□□ -0.1
VPS33B-202ENST00000535906 MMEP08473 750 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 GLRA2P23416 452 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 EDNRBP24530 442 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 GTF2H1P32780 548 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 LIG4P49917 911 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 DCAF12L1Q5VU92 463 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 MREGQ8N565 214 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 PROCA1Q8NCQ7 364 aaPredicted RBP14.41□□□□□ -0.1
VPS33B-202ENST00000535906 ZNF516Q92618 1163 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 OTUD5Q96G74 571 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 CLMNQ96JQ2 1002 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 PAGR1Q9BTK6 254 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 PI4K2AQ9BTU6 479 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 PORCNQ9H237 461 aa14.41□□□□□ -0.1
VPS33B-202ENST00000535906 ZNF233A6NK53 670 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 RTN2O75298 545 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 FAM153BP0C7A2 387 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 ITGA4P13612 1032 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 WNT7BP56706 349 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms