RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 KIAA0319Q5VV43 1072 aa22.85■■□□□ 1.25
LTBR-205ENST00000535739 CCDC149Q6ZUS6 474 aa22.85■■□□□ 1.25
LTBR-205ENST00000535739 RNF168Q8IYW5 571 aaPredicted RBP22.85■■□□□ 1.25
LTBR-205ENST00000535739 MAN1C1Q9NR34 630 aa22.85■■□□□ 1.25
LTBR-205ENST00000535739 FAM86C1Q9NVL1 165 aa22.85■■□□□ 1.25
LTBR-205ENST00000535739 SSX2IPQ9Y2D8 614 aa22.85■■□□□ 1.25
LTBR-205ENST00000535739 GIT1Q9Y2X7 761 aa22.85■■□□□ 1.25
LTBR-205ENST00000535739 MYBP10242 640 aa22.84■■□□□ 1.25
LTBR-205ENST00000535739 XRCC6P12956 609 aaKnown RBP eCLIP22.84■■□□□ 1.25
LTBR-205ENST00000535739 MCM7P33993 719 aa22.84■■□□□ 1.25
LTBR-205ENST00000535739 GLUD2P49448 558 aa22.84■■□□□ 1.25
LTBR-205ENST00000535739 SLC27A1Q6PCB7 646 aa22.84■■□□□ 1.25
LTBR-205ENST00000535739 HACE1Q8IYU2 909 aa22.84■■□□□ 1.25
LTBR-205ENST00000535739 GSTCDQ8NEC7 633 aa22.84■■□□□ 1.25
LTBR-205ENST00000535739 ACSF2Q96CM8 615 aaPredicted RBP22.84■■□□□ 1.25
LTBR-205ENST00000535739 KLK14Q9P0G3 267 aa22.84■■□□□ 1.25
LTBR-205ENST00000535739 ZFHX2Q9C0A1 2572 aaPredicted RBP22.83■■□□□ 1.25
LTBR-205ENST00000535739 A0A1B0GUA9 196 aa22.83■■□□□ 1.25
LTBR-205ENST00000535739 LRRIQ4A6NIV6 560 aa22.83■■□□□ 1.25
LTBR-205ENST00000535739 ADH1AP07327 375 aa22.83■■□□□ 1.25
LTBR-205ENST00000535739 C15orf39Q6ZRI6 1047 aa22.83■■□□□ 1.25
LTBR-205ENST00000535739 OTOP3Q7RTS5 596 aa22.83■■□□□ 1.25
LTBR-205ENST00000535739 CATSPER3Q86XQ3 398 aa22.83■■□□□ 1.25
LTBR-205ENST00000535739 B3GALT6Q96L58 329 aa22.83■■□□□ 1.25
LTBR-205ENST00000535739 COLEC11Q9BWP8 271 aa22.83■■□□□ 1.25
LTBR-205ENST00000535739 RXFP1Q9HBX9 757 aa22.83■■□□□ 1.25
LTBR-205ENST00000535739 DOCK8Q8NF50 2099 aa22.83■■□□□ 1.24
LTBR-205ENST00000535739 VPS13AQ96RL7 3174 aa22.83■■□□□ 1.24
LTBR-205ENST00000535739 DOCK6Q96HP0 2047 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 MYO15AQ9UKN7 3530 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 CFAP54Q96N23 3096 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 MED24O75448 989 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 NR1I2O75469 434 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 DSG1Q02413 1049 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 TMEM105Q8N8V8 129 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 RABGGTAQ92696 567 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 GPR62Q9BZJ7 368 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 TUFT1Q9NNX1 390 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 PARP2Q9UGN5 583 aa22.82■■□□□ 1.24
LTBR-205ENST00000535739 CCDC195A0A1B0GUA6 201 aa22.81■■□□□ 1.24
LTBR-205ENST00000535739 H0Y858 1186 aa22.81■■□□□ 1.24
LTBR-205ENST00000535739 SEC24BO95487 1268 aa22.81■■□□□ 1.24
LTBR-205ENST00000535739 GLUD1P00367 558 aa22.81■■□□□ 1.24
LTBR-205ENST00000535739 SPATA31D3P0C874 917 aa22.81■■□□□ 1.24
LTBR-205ENST00000535739 SPATA31D4Q6ZUB0 917 aa22.81■■□□□ 1.24
LTBR-205ENST00000535739 CMASQ8NFW8 434 aaPredicted RBP22.81■■□□□ 1.24
LTBR-205ENST00000535739 ATOH1Q92858 354 aaPredicted RBP22.81■■□□□ 1.24
LTBR-205ENST00000535739 CHST7Q9NS84 486 aa22.81■■□□□ 1.24
LTBR-205ENST00000535739 CACNG4Q9UBN1 327 aa22.81■■□□□ 1.24
LTBR-205ENST00000535739 TRIP11Q15643 1979 aa22.8■■□□□ 1.24
LTBR-205ENST00000535739 RFPL2O75678 378 aa22.8■■□□□ 1.24
LTBR-205ENST00000535739 SAFBQ15424 915 aaKnown RBP eCLIP22.8■■□□□ 1.24
LTBR-205ENST00000535739 FUT10Q6P4F1 479 aa22.8■■□□□ 1.24
LTBR-205ENST00000535739 MCPH1Q8NEM0 835 aa22.8■■□□□ 1.24
LTBR-205ENST00000535739 PRMT7Q9NVM4 692 aaPredicted RBP22.8■■□□□ 1.24
LTBR-205ENST00000535739 TTLL13PA6NNM8 815 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 GALR2O43603 387 aaPredicted RBP22.79■■□□□ 1.24
LTBR-205ENST00000535739 N4BP1O75113 896 aaKnown RBP22.79■■□□□ 1.24
LTBR-205ENST00000535739 NUBP1P53384 320 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 GRIK3Q13003 919 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 ZNF174Q15697 407 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 CDCA2Q69YH5 1023 aaPredicted RBP22.79■■□□□ 1.24
LTBR-205ENST00000535739 POTEGQ6S5H5 508 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 PPP4R3CPQ6ZMV5 832 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 PALB2Q86YC2 1186 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 GLYCTKQ8IVS8 523 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 BSNDQ8WZ55 320 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 PRIMPOLQ96LW4 560 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 NACC1Q96RE7 527 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 POLR3CQ9BUI4 534 aaPredicted RBP22.79■■□□□ 1.24
LTBR-205ENST00000535739 MFSD1Q9H3U5 465 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 FZD8Q9H461 694 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 KCNK12Q9HB15 430 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 ADAM28Q9UKQ2 775 aa22.79■■□□□ 1.24
LTBR-205ENST00000535739 TDGQ13569 410 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 USP41Q3LFD5 358 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 ASTLQ6HA08 431 aaPredicted RBP22.78■■□□□ 1.24
LTBR-205ENST00000535739 ELMSAN1Q6PJG2 1045 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 CCDC83Q8IWF9 413 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 ZBTB8OSQ8IWT0 167 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 RIN2Q8WYP3 895 aaPredicted RBP22.78■■□□□ 1.24
LTBR-205ENST00000535739 C8orf76Q96K31 380 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 PAAF1Q9BRP4 392 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 IRF2BPLQ9H1B7 796 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 WDR6Q9NNW5 1121 aaKnown RBP22.78■■□□□ 1.24
LTBR-205ENST00000535739 DPP7Q9UHL4 492 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 USP20Q9Y2K6 914 aa22.78■■□□□ 1.24
LTBR-205ENST00000535739 ZMYM2Q9UBW7 1377 aa22.77■■□□□ 1.24
LTBR-205ENST00000535739 OR52Z1P0C646 297 aa22.77■■□□□ 1.24
LTBR-205ENST00000535739 RPL17P18621 184 aaKnown RBP22.77■■□□□ 1.24
LTBR-205ENST00000535739 FAM187BQ17R55 369 aa22.77■■□□□ 1.24
LTBR-205ENST00000535739 PADI6Q6TGC4 694 aa22.77■■□□□ 1.24
LTBR-205ENST00000535739 SMG7Q92540 1137 aaKnown RBP22.77■■□□□ 1.24
LTBR-205ENST00000535739 ZNF707Q96C28 371 aaPredicted RBP22.77■■□□□ 1.24
LTBR-205ENST00000535739 PDZD7Q9H5P4 517 aa22.77■■□□□ 1.24
LTBR-205ENST00000535739 LIMCH1Q9UPQ0 1083 aa22.77■■□□□ 1.24
LTBR-205ENST00000535739 TGM5O43548 720 aa22.76■■□□□ 1.23
LTBR-205ENST00000535739 TADA2AO75478 443 aa22.76■■□□□ 1.23
LTBR-205ENST00000535739 LIG1P18858 919 aa22.76■■□□□ 1.23
LTBR-205ENST00000535739 RPA1P27694 616 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms