RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 C11orf16Q9NQ32 467 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 BARX2Q9UMQ3 279 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-202ENST00000535685 PIEZO1Q92508 2521 aa11.97□□□□□ -0.49
CCDC60-202ENST00000535685 A0A1B0GUA9 196 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 LOC730098B7Z3J9 87 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 INO80B-WBP1J3KQ70 363 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 DCXO43602 365 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 USO1O60763 962 aaKnown RBP11.96□□□□□ -0.49
CCDC60-202ENST00000535685 ZC3H11AO75152 810 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCDC60-202ENST00000535685 CSPG5O95196 566 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 EFEMP2O95967 443 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 ALDH2P05091 517 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 ITGA4P13612 1032 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 ARF4P18085 180 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-202ENST00000535685 SLC11A1P49279 550 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 RNASELQ05823 741 aaKnown RBP11.96□□□□□ -0.49
CCDC60-202ENST00000535685 DSC1Q08554 894 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 CLUL1Q15846 466 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 HERC4Q5GLZ8 1057 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-202ENST00000535685 ANKRD54Q6NXT1 300 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 SYCE2Q6PIF2 218 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 TMEM173Q86WV6 379 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-202ENST00000535685 ZNF280BQ86YH2 543 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 VPS52Q8N1B4 723 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 KCTD17Q8N5Z5 321 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 CASP10Q92851 521 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 TMX3Q96JJ7 454 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 PHF7Q9BWX1 381 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-202ENST00000535685 RAB34Q9BZG1 259 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 C2orf40Q9H1Z8 148 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 PRMT7Q9NVM4 692 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-202ENST00000535685 LHX6Q9UPM6 363 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 GIT1Q9Y2X7 761 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 USP15Q9Y4E8 981 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-202ENST00000535685 IPPQ9Y573 584 aa11.96□□□□□ -0.49
CCDC60-202ENST00000535685 CITO14578 2027 aa11.96□□□□□ -0.5
CCDC60-202ENST00000535685 NT5C1B-RDH14C9J2C7 533 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 B4GALT3O60512 393 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 LILRB3O75022 631 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 CLASP2O75122 1294 aaKnown RBP11.95□□□□□ -0.5
CCDC60-202ENST00000535685 DDHD2O94830 711 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 CXCL14O95715 111 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 PRSS12P56730 875 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 GNL2Q13823 731 aaKnown RBP11.95□□□□□ -0.5
CCDC60-202ENST00000535685 SLC27A1Q6PCB7 646 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 COLGALT2Q8IYK4 626 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 GPR65Q8IYL9 337 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 HACE1Q8IYU2 909 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 RNF168Q8IYW5 571 aaPredicted RBP11.95□□□□□ -0.5
CCDC60-202ENST00000535685 BCL7CQ8WUZ0 217 aaPredicted RBP11.95□□□□□ -0.5
CCDC60-202ENST00000535685 VN1R3Q9BXE9 311 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 EIF2AQ9BY44 585 aaKnown RBP11.95□□□□□ -0.5
CCDC60-202ENST00000535685 UPF2Q9HAU5 1272 aaKnown RBP11.95□□□□□ -0.5
CCDC60-202ENST00000535685 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.95□□□□□ -0.5
CCDC60-202ENST00000535685 DNAJB4Q9UDY4 337 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 INPP5FQ9Y2H2 1132 aa11.95□□□□□ -0.5
CCDC60-202ENST00000535685 A0A087WWV3 80 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 ARHGEF35A5YM69 484 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 ARL5CA6NH57 179 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 PRR33A8MZF0 331 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 C1RP00736 705 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 NAMPTP43490 491 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 AFF1P51825 1210 aaKnown RBP11.94□□□□□ -0.5
CCDC60-202ENST00000535685 RBM10P98175 930 aaKnown RBP11.94□□□□□ -0.5
CCDC60-202ENST00000535685 ITIH3Q06033 890 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 PPP2R5AQ15172 486 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 ECM1Q16610 540 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 LONRF3Q496Y0 759 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 RILPL1Q5EBL4 403 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 PPFIBP1Q86W92 1011 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 ZBTB8OSQ8IWT0 167 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 GSTCDQ8NEC7 633 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 SLC22A17Q8WUG5 538 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 KIFAP3Q92845 792 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 CPB2Q96IY4 423 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 TBC1D32Q96NH3 1257 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 FAM193BQ96PV7 902 aaPredicted RBP11.94□□□□□ -0.5
CCDC60-202ENST00000535685 GPRC5CQ9NQ84 441 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 LRWD1Q9UFC0 647 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 FAN1Q9Y2M0 1017 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 PCDHB6Q9Y5E3 794 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 HCFC2Q9Y5Z7 792 aa11.94□□□□□ -0.5
CCDC60-202ENST00000535685 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 DENND4AQ7Z401 1863 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 C2orf16Q68DN1 1984 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 LRRIQ4A6NIV6 560 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 ACKR2O00590 384 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 NRP1O14786 923 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 CCT6AP40227 531 aaKnown RBP11.93□□□□□ -0.5
CCDC60-202ENST00000535685 EFNA5P52803 228 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 PTPN14Q15678 1187 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 RNF135Q8IUD6 432 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 BSNDQ8WZ55 320 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 PCMTD1Q96MG8 357 aaPredicted RBP11.93□□□□□ -0.5
CCDC60-202ENST00000535685 NECTIN4Q96NY8 510 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 GAD1Q99259 594 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 CCDC113Q9H0I3 377 aa11.93□□□□□ -0.5
CCDC60-202ENST00000535685 ADAM7Q9H2U9 754 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms