RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 SYNGAP1Q96PV0 1343 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 CLGNO14967 610 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 PTGIRP43119 386 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 LRRC14Q15048 493 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 ANKRD20A8PQ5CZ79 823 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 MIER3Q7Z3K6 550 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 HOOK3Q86VS8 718 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 PRELID2Q8N945 189 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 ZSWIM2Q8NEG5 633 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 KAT5Q92993 513 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 ZSWIM1Q9BR11 485 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 MXRA8Q9BRK3 442 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 PABPC3Q9H361 631 aaKnown RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 TMEM206Q9H813 350 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 LARSQ9P2J5 1176 aaKnown RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 HERC5Q9UII4 1024 aaKnown RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 PFASO15067 1338 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 SGPL1O95470 568 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 COMTP21964 271 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 DRG2P55039 364 aaKnown RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 PREPLQ4J6C6 727 aaPredicted RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 EPC2Q52LR7 807 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 DENND2CQ68D51 928 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 LDHDQ86WU2 507 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 ZDHHC14Q8IZN3 488 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 CCDC63Q8NA47 563 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 NEK9Q8TD19 979 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 RNF25Q96BH1 459 aaPredicted RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 MIEF2Q96C03 454 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 PCDHB18PQ96TA0 734 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 FAM167BQ9BTA0 163 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 TRIM6Q9C030 488 aaPredicted RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 MCM8Q9UJA3 840 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 ATMINO43313 823 aaPredicted RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 RTN2O75298 545 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 RASSF9O75901 435 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 MMEP08473 750 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 NUDT17P0C025 328 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 ITGB5P18084 799 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 CHRNA3P32297 505 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 C1orf220Q5T0J3 134 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 TTC27Q6P3X3 843 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 PLEKHO2Q8TD55 490 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 NSMCE1Q8WV22 266 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 RSRC1Q96IZ7 334 aaKnown RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 ACCSQ96QU6 501 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 RIT2Q99578 217 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 CNOT10Q9H9A5 744 aaKnown RBP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 FBXO28Q9NVF7 368 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.51□□□□□ -0.89
KPNB1-202ENST00000535458 GRHL1Q9NZI5 618 aa9.51□□□□□ -0.89
KPNB1-202ENST00000535458 CLRN2A0PK11 232 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 C5orf60A6NFR6 353 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 P4HA2O15460 535 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 HSPA6P17066 643 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 CHRNB2P17787 502 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 CTNNA2P26232 953 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 RPL21P46778 160 aaKnown RBP9.5□□□□□ -0.89
KPNB1-202ENST00000535458 PEX5P50542 639 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 BYSLQ13895 437 aaKnown RBP9.5□□□□□ -0.89
KPNB1-202ENST00000535458 SLC29A2Q14542 456 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 TCEAL1Q15170 157 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 GRIPAP1Q4V328 841 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 SEL1L2Q5TEA6 688 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 TRIM68Q6AZZ1 485 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 CCDC137Q6PK04 289 aaKnown RBP9.5□□□□□ -0.89
KPNB1-202ENST00000535458 XXYLT1Q8NBI6 393 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 VTI1AQ96AJ9 217 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 RPS6KC1Q96S38 1066 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 LBHD1Q9BQE6 289 aaPredicted RBP9.5□□□□□ -0.89
KPNB1-202ENST00000535458 SH2D3AQ9BRG2 576 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 ACP6Q9NPH0 428 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 HSPBP1Q9NZL4 362 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 ZBTB21Q9ULJ3 1066 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 ZHX2Q9Y6X8 837 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 ENO4A6NNW6 628 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 P4HBP07237 508 aaKnown RBP9.5□□□□□ -0.89
KPNB1-202ENST00000535458 PYGMP11217 842 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 DRP2Q13474 957 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 ERMARDQ5T6L9 678 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 NOP9Q86U38 636 aaKnown RBP9.5□□□□□ -0.89
KPNB1-202ENST00000535458 CPNE8Q86YQ8 564 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 ANKS4BQ8N8V4 417 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 CCDC197Q8NCU1 140 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 TATDN2Q93075 761 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 SPDL1Q96EA4 605 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 BTBD6Q96KE9 485 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 XPO6Q96QU8 1125 aaKnown RBP9.5□□□□□ -0.89
KPNB1-202ENST00000535458 SEMA4AQ9H3S1 761 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 NOD2Q9HC29 1040 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 KCNH7Q9NS40 1196 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 PCYOX1Q9UHG3 505 aa9.5□□□□□ -0.89
KPNB1-202ENST00000535458 RPTORQ8N122 1335 aa9.49□□□□□ -0.89
KPNB1-202ENST00000535458 TCRBV7S2A1N4TA0A589 114 aa9.49□□□□□ -0.89
KPNB1-202ENST00000535458 GOLGA8IPA6NC78 632 aa9.49□□□□□ -0.89
KPNB1-202ENST00000535458 GOLGA8JA6NMD2 632 aa9.49□□□□□ -0.89
KPNB1-202ENST00000535458 CCDC169A6NNP5 214 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms