RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 TLCD1Q96CP7 247 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 FAM20AQ96MK3 541 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 RUNDC3BQ96NL0 473 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 TMEM237Q96Q45 408 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 CCDC77Q9BR77 488 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 KIFC3Q9BVG8 833 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 YIPF3Q9GZM5 350 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ZDHHC18Q9NUE0 388 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ANKRD36CQ5JPF3 1778 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 PFASO15067 1338 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 BTNL10A8MVZ5 291 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 MIF4GDA9UHW6 222 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 PPIP5K2O43314 1243 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 SNX3O60493 162 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 SLITRK3O94933 977 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 KRT16P08779 473 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 HARSP12081 509 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 VCAM1P19320 739 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ITGA8P53708 1063 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 PPP3CAQ08209 521 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 AP3B2Q13367 1082 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 TAF11Q15544 211 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 CNGA2Q16280 664 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ATXN2LQ8WWM7 1075 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 CPA5Q8WXQ8 436 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ZNF317Q96PQ6 595 aaPredicted RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 PPP1R12CQ9BZL4 782 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 TRIM7Q9C029 511 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ALG13Q9NP73 1137 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 GPRC5CQ9NQ84 441 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 CHST7Q9NS84 486 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 LARSQ9P2J5 1176 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 SCAF8Q9UPN6 1271 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 PI4K2BG5E9Z4 385 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 FOSP01100 380 aaPredicted RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 MYCLP12524 364 aaPredicted RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 TARSP26639 723 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 CCDC6Q16204 474 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 NAIF1Q69YI7 327 aaPredicted RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 PADI6Q6TGC4 694 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ZNF720Q7Z2F6 126 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 MIER3Q7Z3K6 550 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ERICH1Q86X53 443 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ERP27Q96DN0 273 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 PGM2Q96G03 612 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 TDRD3Q9H7E2 651 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 TOPORSQ9NS56 1045 aaPredicted RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 GRHL1Q9NZI5 618 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 INTUQ9ULD6 942 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ATF5Q9Y2D1 282 aaPredicted RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 CCDC88AQ3V6T2 1871 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ABCA3Q99758 1704 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 DNAJC8O75937 253 aaPredicted RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 SNHG28P0DPA3 235 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 ARP10275 920 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 RARGP13631 454 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 ATP5DP30049 168 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 ECE1P42892 770 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 NPEPPSP55786 919 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 PPATQ06203 517 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 HYIQ5T013 277 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 ZDHHC14Q8IZN3 488 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 C3orf20Q8ND61 904 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 C1orf131Q8NDD1 294 aaKnown RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 SPIRE2Q8WWL2 714 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 P3H4Q92791 437 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 SLC5A5Q92911 643 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 NACC1Q96RE7 527 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 PAGR1Q9BTK6 254 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 DNAJC18Q9H819 358 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 DCTN4Q9UJW0 460 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 GGA2Q9UJY4 613 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 USP20Q9Y2K6 914 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 EXOC1LA0A1B0GW35 172 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 CLRN2A0PK11 232 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 C5orf60A6NFR6 353 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 TCP10L2B9ZVM9 353 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 POLR2MP0CAP2 368 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 CD58P19256 250 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 CRKP46108 304 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 NT5C2P49902 561 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 COPS2P61201 443 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 SPIRE1Q08AE8 756 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 RFX8Q6ZV50 586 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 NOP9Q86U38 636 aaKnown RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 EIF1ADQ8N9N8 165 aaKnown RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 SUPT20HQ8NEM7 779 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 CCDC17Q96LX7 622 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 PCDHB18PQ96TA0 734 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 ZNF148Q9UQR1 794 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 DIS3Q9Y2L1 958 aaKnown RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 KAT6AQ92794 2004 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 GOLGA8RI6L899 631 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 PPEF1O14829 653 aaPredicted RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 ASAP2O43150 1006 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 MGRN1O60291 552 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 NUDT17P0C025 328 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 CA4P22748 312 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 CTNNA2P26232 953 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms