RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 DGAT1O75907 488 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 EFEMP2O95967 443 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 ADH1AP07327 375 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 MLH1P40692 756 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 OR1G1P47890 313 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 GLUD2P49448 558 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 CYP26C1Q6V0L0 522 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 HACE1Q8IYU2 909 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 GAD1Q99259 594 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 HSD17B14Q9BPX1 270 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 NFKBIZQ9BYH8 718 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 RHOBTB2Q9BYZ6 727 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 MAN1C1Q9NR34 630 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 ANKEF1Q9NU02 776 aa13.93□□□□□ -0.18
USF1-211ENST00000534633 PRG3Q9Y2Y8 225 aaPredicted RBP13.93□□□□□ -0.18
USF1-211ENST00000534633 TEX28O15482 410 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 NR1I2O75469 434 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 GLUD1P00367 558 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 C1RP00736 705 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 ARL2P36404 184 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 SCNN1GP51170 649 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 MBTD1Q05BQ5 628 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 TDGQ13569 410 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 CAPSQ13938 189 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 CALCRLQ16602 461 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 AMHR2Q16671 573 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 KIAA0319Q5VV43 1072 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 INTS4Q96HW7 963 aaKnown RBP13.92□□□□□ -0.18
USF1-211ENST00000534633 CPB2Q96IY4 423 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 ZFP42Q96MM3 310 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 CCDC43Q96MW1 224 aaKnown RBP13.92□□□□□ -0.18
USF1-211ENST00000534633 TRIM6Q9C030 488 aaPredicted RBP13.92□□□□□ -0.18
USF1-211ENST00000534633 TTC12Q9H892 705 aaPredicted RBP13.92□□□□□ -0.18
USF1-211ENST00000534633 RXFP1Q9HBX9 757 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 IGSF9Q9P2J2 1179 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 DUSP12Q9UNI6 340 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 SMC3Q9UQE7 1217 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 GIT1Q9Y2X7 761 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 HES2Q9Y543 173 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.92□□□□□ -0.18
USF1-211ENST00000534633 ZFHX2Q9C0A1 2572 aaPredicted RBP13.92□□□□□ -0.18
USF1-211ENST00000534633 ZMYM2Q9UBW7 1377 aa13.92□□□□□ -0.18
USF1-211ENST00000534633 NEMFO60524 1076 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 ARF4P18085 180 aaPredicted RBP13.91□□□□□ -0.18
USF1-211ENST00000534633 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.18
USF1-211ENST00000534633 RARRES1P49788 294 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 DSG1Q02413 1049 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 TRIM29Q14134 588 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 TAS1R1Q7RTX1 841 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 GPR65Q8IYL9 337 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 ASAP3Q8TDY4 903 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 HDAC7Q8WUI4 952 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 STAMQ92783 540 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 COLEC11Q9BWP8 271 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 APOL6Q9BWW8 343 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 FOXP1Q9H334 677 aaPredicted RBP13.91□□□□□ -0.18
USF1-211ENST00000534633 NXF3Q9H4D5 531 aaKnown RBP13.91□□□□□ -0.18
USF1-211ENST00000534633 KCNK12Q9HB15 430 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 CHST7Q9NS84 486 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 MIOSQ9NXC5 875 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 TRIP11Q15643 1979 aa13.91□□□□□ -0.18
USF1-211ENST00000534633 DOCK6Q96HP0 2047 aa13.9□□□□□ -0.18
USF1-211ENST00000534633 CCDC195A0A1B0GUA6 201 aa13.9□□□□□ -0.18
USF1-211ENST00000534633 PAPLNO95428 1278 aa13.9□□□□□ -0.18
USF1-211ENST00000534633 XRCC6P12956 609 aaKnown RBP eCLIP13.9□□□□□ -0.18
USF1-211ENST00000534633 GLRA2P23416 452 aa13.9□□□□□ -0.18
USF1-211ENST00000534633 NBL1P41271 181 aa13.9□□□□□ -0.18
USF1-211ENST00000534633 GRIK3Q13003 919 aa13.9□□□□□ -0.18
USF1-211ENST00000534633 CWF19L1Q69YN2 538 aaKnown RBP13.9□□□□□ -0.18
USF1-211ENST00000534633 SLC27A1Q6PCB7 646 aa13.9□□□□□ -0.18
USF1-211ENST00000534633 PLEKHA4Q9H4M7 779 aa13.9□□□□□ -0.18
USF1-211ENST00000534633 WDR6Q9NNW5 1121 aaKnown RBP13.9□□□□□ -0.18
USF1-211ENST00000534633 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.9□□□□□ -0.18
USF1-211ENST00000534633 VPS13AQ96RL7 3174 aa13.9□□□□□ -0.18
USF1-211ENST00000534633 CLUHO75153 1309 aa13.9□□□□□ -0.19
USF1-211ENST00000534633 A0A1B0GUA9 196 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 F8W810 466 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 N4BP1O75113 896 aaKnown RBP13.89□□□□□ -0.19
USF1-211ENST00000534633 AOC1P19801 751 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 TXKP42681 527 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 TOB1P50616 345 aaPredicted RBP13.89□□□□□ -0.19
USF1-211ENST00000534633 CREMQ03060 361 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 USP41Q3LFD5 358 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
USF1-211ENST00000534633 FUT10Q6P4F1 479 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 NOSTRINQ8IVI9 506 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 GSTCDQ8NEC7 633 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 FLCNQ8NFG4 579 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 PIGOQ8TEQ8 1089 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 PRIMPOLQ96LW4 560 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 MTMR9Q96QG7 549 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 POLR3FQ9H1D9 316 aaPredicted RBP13.89□□□□□ -0.19
USF1-211ENST00000534633 FNIP2Q9P278 1114 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 FBXL21Q9UKT6 434 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 VWA8A3KMH1 1905 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 MYH15Q9Y2K3 1946 aa13.89□□□□□ -0.19
USF1-211ENST00000534633 FAM186AA6NE01 2351 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 B4GALT5O43286 388 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms