RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 PKD2L1Q9P0L9 805 aa10.17□□□□□ -0.78
PACS1-213ENST00000533756 DKK4Q9UBT3 224 aa10.17□□□□□ -0.78
PACS1-213ENST00000533756 FBXW11Q9UKB1 542 aa10.17□□□□□ -0.78
PACS1-213ENST00000533756 UBIAD1Q9Y5Z9 338 aa10.17□□□□□ -0.78
PACS1-213ENST00000533756 CELSR3Q9NYQ7 3312 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 NFASCO94856 1347 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 SPAARA0A1B0GVQ0 90 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 PIK3CDO00329 1044 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 MAGEB2O15479 319 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 FGAP02671 866 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 RAB27AP51159 221 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 PPM1LQ5SGD2 360 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 LIN9Q5TKA1 542 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 VPS53Q5VIR6 699 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 PDXDC1Q6P996 788 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 Q6ZS52 159 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 HOMER1Q86YM7 354 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 SMARCC2Q8TAQ2 1214 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 CUL5Q93034 780 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 PGBD4Q96DM1 585 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 MCRS1Q96EZ8 462 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 GPATCH3Q96I76 525 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 MAP7D2Q96T17 732 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 LRRCC1Q9C099 1032 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 RNF41Q9H4P4 317 aaPredicted RBP10.16□□□□□ -0.78
PACS1-213ENST00000533756 ZFP14Q9HCL3 533 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 RBM12Q9NTZ6 932 aaKnown RBP10.16□□□□□ -0.78
PACS1-213ENST00000533756 MARCH5Q9NX47 278 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 POLIQ9UNA4 740 aa10.16□□□□□ -0.78
PACS1-213ENST00000533756 A0A087WV48 116 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 PNMA6FA0A0J9YX94 578 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 MEIS3P2A8K0S8 358 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 TMOD1P28289 359 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 KCNC4Q03721 635 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 GRM2Q14416 872 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 UVSSAQ2YD98 709 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 USP41Q3LFD5 358 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 LONRF3Q496Y0 759 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 PABPC1LQ4VXU2 614 aaKnown RBP10.15□□□□□ -0.78
PACS1-213ENST00000533756 FAM160B1Q5W0V3 765 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 TWF2Q6IBS0 349 aaKnown RBP10.15□□□□□ -0.78
PACS1-213ENST00000533756 CCNI2Q6ZMN8 369 aaPredicted RBP10.15□□□□□ -0.78
PACS1-213ENST00000533756 PIP4P1Q86T03 277 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 SCUBE3Q8IX30 993 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 SIRT2Q8IXJ6 389 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 PIGSQ96S52 555 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 SDF4Q9BRK5 362 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 RIOX1Q9H6W3 641 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 FAM105AQ9NUU6 356 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.15□□□□□ -0.78
PACS1-213ENST00000533756 AKT3Q9Y243 479 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 MRPS23Q9Y3D9 190 aaKnown RBP10.15□□□□□ -0.78
PACS1-213ENST00000533756 PCDHB15Q9Y5E8 787 aa10.15□□□□□ -0.78
PACS1-213ENST00000533756 ZNF462Q96JM2 2506 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 F5P12259 2224 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 ZMYM6O95789 1325 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 PALM3A6NDB9 673 aaPredicted RBP10.14□□□□□ -0.79
PACS1-213ENST00000533756 CAPN9O14815 690 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 CCL16O15467 120 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 ANP32CO43423 234 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 C8AP07357 584 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 RLBP1P12271 317 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 PSMC3P17980 439 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 GDI1P31150 447 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 HOXC13P31276 330 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 GPC3P51654 580 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 HNRNPDQ14103 355 aaKnown RBP10.14□□□□□ -0.79
PACS1-213ENST00000533756 USP17L6PQ6QN14 398 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 AGMOQ6ZNB7 445 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 RTL10Q7L3V2 364 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 GLYCTKQ8IVS8 523 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 CAMKK1Q8N5S9 505 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 LINC01465Q8N7H1 131 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 MDM1Q8TC05 714 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 ZSCAN10Q96SZ4 725 aaPredicted RBP10.14□□□□□ -0.79
PACS1-213ENST00000533756 APOL6Q9BWW8 343 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 C8orf33Q9H7E9 229 aaPredicted RBP10.14□□□□□ -0.79
PACS1-213ENST00000533756 AVENQ9NQS1 362 aaPredicted RBP10.14□□□□□ -0.79
PACS1-213ENST00000533756 DNMT3BQ9UBC3 853 aaKnown RBP10.14□□□□□ -0.79
PACS1-213ENST00000533756 CEP131Q9UPN4 1083 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 PRG3Q9Y2Y8 225 aaPredicted RBP10.14□□□□□ -0.79
PACS1-213ENST00000533756 SPAG17Q6Q759 2223 aa10.14□□□□□ -0.79
PACS1-213ENST00000533756 COL4A2P08572 1712 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 CNTNAP2Q9UHC6 1331 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 SDK1Q7Z5N4 2213 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 MEIS2O14770 477 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 BACH1O14867 736 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 MEFVO15553 781 aaPredicted RBP10.13□□□□□ -0.79
PACS1-213ENST00000533756 ZNF862O60290 1169 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 NR1I2O75469 434 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 FGFR4P22455 802 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 FCARP24071 287 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 OR1G1P47890 313 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 PXNP49023 591 aaPredicted RBP10.13□□□□□ -0.79
PACS1-213ENST00000533756 CLCN3P51790 818 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 CDC42EP1Q00587 391 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 LMAN2Q12907 356 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 SEMA3BQ13214 749 aa10.13□□□□□ -0.79
PACS1-213ENST00000533756 KARSQ15046 597 aaKnown RBP10.13□□□□□ -0.79
PACS1-213ENST00000533756 EFCAB12Q6NXP0 572 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms