RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 KIFAP3Q92845 792 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 PRIMPOLQ96LW4 560 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 ADPGKQ9BRR6 497 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 LRFN3Q9BTN0 628 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 RUSC1Q9BVN2 902 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 PDZD7Q9H5P4 517 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 SNTG2Q9NY99 539 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 CDH22Q9UJ99 828 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 GIT1Q9Y2X7 761 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 MUC3AQ02505 3323 aa11.52□□□□□ -0.57
CAPN1-225ENST00000533704 MTCL1Q9Y4B5 1905 aaKnown RBP11.51□□□□□ -0.57
CAPN1-225ENST00000533704 F8W810 466 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 HIP1RO75146 1068 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 EDN1P05305 212 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 URODP06132 367 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 WEE2P0C1S8 567 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 EPCAMP16422 314 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 KLRC2P26717 231 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 PEX3P56589 373 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 RAD51AP2Q09MP3 1159 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 KCNC3Q14003 757 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 PTPN14Q15678 1187 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 FAM187BQ17R55 369 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 TPRNQ4KMQ1 711 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 RARS2Q5T160 578 aaKnown RBP11.51□□□□□ -0.57
CAPN1-225ENST00000533704 EEF1DP3Q658K8 133 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 CES5AQ6NT32 575 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 TMEM184AQ6ZMB5 413 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 RNF135Q8IUD6 432 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 COLGALT2Q8IYK4 626 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 C12orf76Q8N812 135 aaPredicted RBP11.51□□□□□ -0.57
CAPN1-225ENST00000533704 MMTAG2Q9BU76 263 aaKnown RBP11.51□□□□□ -0.57
CAPN1-225ENST00000533704 COLEC11Q9BWP8 271 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 PHF7Q9BWX1 381 aaPredicted RBP11.51□□□□□ -0.57
CAPN1-225ENST00000533704 EMILIN2Q9BXX0 1053 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 CCDC113Q9H0I3 377 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 MRPL17Q9NRX2 175 aaKnown RBP11.51□□□□□ -0.57
CAPN1-225ENST00000533704 FOXD4L1Q9NU39 408 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 MARCH5Q9NX47 278 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 CACNG4Q9UBN1 327 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 MUTYHQ9UIF7 546 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 GDAQ9Y2T3 454 aa11.51□□□□□ -0.57
CAPN1-225ENST00000533704 K7ERI5 159 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 ACKR2O00590 384 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 RECQL4O94761 1208 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 HOXB8P17481 243 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-225ENST00000533704 EFNA5P52803 228 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 DSC1Q08554 894 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 GRIK3Q13003 919 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 DMP1Q13316 513 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-225ENST00000533704 GIT2Q14161 759 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 CBX2Q14781 532 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-225ENST00000533704 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 KIAA1841Q6NSI8 718 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 RINT1Q6NUQ1 792 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 KANK3Q6NY19 840 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 TAS1R1Q7RTX1 841 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 CABP7Q86V35 215 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 RASSF8Q8NHQ8 419 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 DRC1Q96MC2 740 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 KLHL5Q96PQ7 755 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 PNMA5Q96PV4 448 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 HERC2P3Q9BVR0 1158 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 S1PR5Q9H228 398 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 KMT5AQ9NQR1 393 aa11.5□□□□□ -0.57
CAPN1-225ENST00000533704 VWA8A3KMH1 1905 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 MYH15Q9Y2K3 1946 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 CASTOR2A6NHX0 329 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 SFI1A8K8P3 1242 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 INPPL1O15357 1258 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 SLC16A4O15374 487 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 TADA2AO75478 443 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 SOD2P04179 222 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 CNPP09543 421 aaKnown RBP11.49□□□□□ -0.57
CAPN1-225ENST00000533704 MYBP10242 640 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 HARSP12081 509 aaKnown RBP11.49□□□□□ -0.57
CAPN1-225ENST00000533704 NPTX2P47972 431 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 GLUD2P49448 558 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 DHX8Q14562 1220 aaKnown RBP11.49□□□□□ -0.57
CAPN1-225ENST00000533704 DCAF4L1Q3SXM0 396 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 NT5DC1Q5TFE4 455 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 BRAPQ7Z569 592 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 APBB1IPQ7Z5R6 666 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-225ENST00000533704 ZBTB33Q86T24 672 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 PPFIBP1Q86W92 1011 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 GSTCDQ8NEC7 633 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 HASPINQ8TF76 798 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 SUSD6Q92537 303 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 B3GALT6Q96L58 329 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 C11orf16Q9NQ32 467 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 DZANK1Q9NVP4 752 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 STK39Q9UEW8 545 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 IRAK3Q9Y616 596 aa11.49□□□□□ -0.57
CAPN1-225ENST00000533704 PDCD11Q14690 1871 aaKnown RBP11.49□□□□□ -0.57
CAPN1-225ENST00000533704 TECTAO75443 2155 aa11.48□□□□□ -0.57
CAPN1-225ENST00000533704 NPHP3-ACAD11A0A0J9YXS1 232 aa11.48□□□□□ -0.57
CAPN1-225ENST00000533704 LOC730098B7Z3J9 87 aa11.48□□□□□ -0.57
CAPN1-225ENST00000533704 GPR37L1O60883 481 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms