RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 ANKRD63C9JTQ0 380 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 PTMSP20962 102 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 IBSPP21815 317 aaPredicted RBP18■□□□□ 0.47
PACSIN3-210ENST00000533686 HOXD13P35453 343 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 RABGGTBP53611 331 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 SNRPFP62306 86 aaKnown RBP18■□□□□ 0.47
PACSIN3-210ENST00000533686 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
PACSIN3-210ENST00000533686 CAMK4Q16566 473 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 SLC39A4Q6P5W5 647 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 AGMOQ6ZNB7 445 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 RNF169Q8NCN4 708 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 SP7Q8TDD2 431 aaPredicted RBP18■□□□□ 0.47
PACSIN3-210ENST00000533686 ERCC4Q92889 916 aaPredicted RBP18■□□□□ 0.47
PACSIN3-210ENST00000533686 YME1L1Q96TA2 773 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 PBX4Q9BYU1 374 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 TMEM117Q9H0C3 514 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 NXF3Q9H4D5 531 aaKnown RBP18■□□□□ 0.47
PACSIN3-210ENST00000533686 KIAA1468Q9P260 1216 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 MSRAQ9UJ68 235 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 GIT1Q9Y2X7 761 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 ZMYM2Q9UBW7 1377 aa18■□□□□ 0.47
PACSIN3-210ENST00000533686 A0A0B4J269 797 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 INPPL1O15357 1258 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 FGFR1P11362 822 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 GRM5P41594 1212 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 KYAT1Q16773 422 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 KNOP1Q1ED39 458 aaKnown RBP17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 COBLL1Q53SF7 1204 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 ZNF658Q5TYW1 1059 aaPredicted RBP17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 GLB1LQ6UWU2 654 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 ZBTB33Q86T24 672 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 CMTR2Q8IYT2 770 aaKnown RBP17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 LPPQ93052 612 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 HAPLN2Q9GZV7 340 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 GBP3Q9H0R5 595 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 NUP62CLQ9H1M0 184 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 RNF39Q9H2S5 420 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 RSAD1Q9HA92 442 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 CGNQ9P2M7 1197 aaKnown RBP17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 ANKFY1Q9P2R3 1169 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 HES2Q9Y543 173 aa17.99■□□□□ 0.47
PACSIN3-210ENST00000533686 MEIS3P2A8K0S8 358 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 OFD1O75665 1012 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 GARTP22102 1010 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 ADSSP30520 456 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 MATR3P43243 847 aaKnown RBP eCLIP17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 HABP4Q5JVS0 413 aaKnown RBP17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 CLLU1OSQ5K130 101 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 ABI1Q8IZP0 508 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 GUF1Q8N442 669 aaKnown RBP17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 CASD1Q96PB1 797 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 CCDC94Q9BW85 323 aaPredicted RBP17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 IKZF4Q9H2S9 585 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 SNTG2Q9NY99 539 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 MAN1B1Q9UKM7 699 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 GDAQ9Y2T3 454 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 TRIOBPQ9H2D6 2365 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 PTPRSQ13332 1948 aa17.98■□□□□ 0.47
PACSIN3-210ENST00000533686 COL4A6Q14031 1691 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 TBKBP1A7MCY6 615 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 KIAA0391O15091 583 aaKnown RBP17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 OGTO15294 1046 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 TGFB1I1O43294 461 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 PBX2P40425 430 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 POU5F1Q01860 360 aaKnown RBP17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 HS2ST1Q7LGA3 356 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 NELFCDQ8IXH7 590 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 TRIML1Q8N9V2 468 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 GOLGA5Q8TBA6 731 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 HELQQ8TDG4 1101 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 POMGNT1Q8WZA1 660 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 PARP2Q9UGN5 583 aa17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 AGO2Q9UKV8 859 aaKnown RBP17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 YBX2Q9Y2T7 364 aaKnown RBP17.97■□□□□ 0.47
PACSIN3-210ENST00000533686 TISP43B9A030 160 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 FAM189A1O60320 539 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 RECQL4O94761 1208 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 CLTAP09496 248 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 HARSP12081 509 aaKnown RBP17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 MYOGP15173 224 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 AKAP5P24588 427 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 DNAJB2P25686 324 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 GATMP50440 423 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 MORC3Q14149 939 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 BTG3Q14201 252 aaPredicted RBP17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 NOMO2Q5JPE7 1267 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 C12orf56Q8IXR9 622 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 THNSL1Q8IYQ7 743 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 CEP120Q8N960 986 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 TMEM174Q8WUU8 243 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 ACAP3Q96P50 834 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 MSTO1Q9BUK6 570 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 APOL6Q9BWW8 343 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 MRPL9Q9BYD2 267 aaKnown RBP17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 KCTD10Q9H3F6 313 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 TOPORSQ9NS56 1045 aaPredicted RBP17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 KANSL3Q9P2N6 904 aa17.96■□□□□ 0.47
PACSIN3-210ENST00000533686 TMEM265A0A087WTH1 108 aa17.95■□□□□ 0.46
PACSIN3-210ENST00000533686 LCHNA4D1U4 455 aa17.95■□□□□ 0.46
PACSIN3-210ENST00000533686 ARL5CA6NH57 179 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms