RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 VN1R3Q9BXE9 311 aa17.06■□□□□ 0.32
CPSF1-211ENST00000533492 ADAM7Q9H2U9 754 aa17.06■□□□□ 0.32
CPSF1-211ENST00000533492 POLD4Q9HCU8 107 aa17.06■□□□□ 0.32
CPSF1-211ENST00000533492 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.06■□□□□ 0.32
CPSF1-211ENST00000533492 DZANK1Q9NVP4 752 aa17.06■□□□□ 0.32
CPSF1-211ENST00000533492 KLK14Q9P0G3 267 aa17.06■□□□□ 0.32
CPSF1-211ENST00000533492 SMC3Q9UQE7 1217 aa17.06■□□□□ 0.32
CPSF1-211ENST00000533492 SSX2IPQ9Y2D8 614 aa17.06■□□□□ 0.32
CPSF1-211ENST00000533492 ACKR2O00590 384 aa17.05■□□□□ 0.32
CPSF1-211ENST00000533492 SOD2P04179 222 aa17.05■□□□□ 0.32
CPSF1-211ENST00000533492 PRKCBP05771 671 aa17.05■□□□□ 0.32
CPSF1-211ENST00000533492 URODP06132 367 aa17.05■□□□□ 0.32
CPSF1-211ENST00000533492 EPCAMP16422 314 aa17.05■□□□□ 0.32
CPSF1-211ENST00000533492 PRPHP41219 470 aa17.05■□□□□ 0.32
CPSF1-211ENST00000533492 DSC1Q08554 894 aa17.05■□□□□ 0.32
CPSF1-211ENST00000533492 RARS2Q5T160 578 aaKnown RBP17.05■□□□□ 0.32
CPSF1-211ENST00000533492 RIPOR3Q96MK2 946 aa17.05■□□□□ 0.32
CPSF1-211ENST00000533492 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.05■□□□□ 0.32
CPSF1-211ENST00000533492 TDRD15B5MCY1 1934 aaKnown RBP17.04■□□□□ 0.32
CPSF1-211ENST00000533492 E9PMD0 336 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 C2CD2LO14523 706 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
CPSF1-211ENST00000533492 SP100P23497 879 aaPredicted RBP17.04■□□□□ 0.32
CPSF1-211ENST00000533492 CDC25AP30304 524 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 MTHFRP42898 656 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 EFNA5P52803 228 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 GRIK3Q13003 919 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 ZRSR1Q15695 479 aaKnown RBP17.04■□□□□ 0.32
CPSF1-211ENST00000533492 ATAT1Q5SQI0 421 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 KIAA1841Q6NSI8 718 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 CABP7Q86V35 215 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 C12orf76Q8N812 135 aaPredicted RBP17.04■□□□□ 0.32
CPSF1-211ENST00000533492 SLC22A17Q8WUG5 538 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 EDAQ92838 391 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 KLHL5Q96PQ7 755 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 PDZD7Q9H5P4 517 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 TSHZ2Q9NRE2 1034 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 MARCH5Q9NX47 278 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 NR2E1Q9Y466 385 aa17.04■□□□□ 0.32
CPSF1-211ENST00000533492 PP2D1A8MPX8 630 aa17.03■□□□□ 0.32
CPSF1-211ENST00000533492 CNPP09543 421 aaKnown RBP17.03■□□□□ 0.32
CPSF1-211ENST00000533492 IL17AQ16552 155 aa17.03■□□□□ 0.32
CPSF1-211ENST00000533492 LARP1BQ659C4 914 aaKnown RBP17.03■□□□□ 0.32
CPSF1-211ENST00000533492 GSTCDQ8NEC7 633 aa17.03■□□□□ 0.32
CPSF1-211ENST00000533492 TBC1D32Q96NH3 1257 aa17.03■□□□□ 0.32
CPSF1-211ENST00000533492 KIFC3Q9BVG8 833 aa17.03■□□□□ 0.32
CPSF1-211ENST00000533492 HERC2P3Q9BVR0 1158 aa17.03■□□□□ 0.32
CPSF1-211ENST00000533492 SNTG2Q9NY99 539 aa17.03■□□□□ 0.32
CPSF1-211ENST00000533492 USP20Q9Y2K6 914 aa17.03■□□□□ 0.32
CPSF1-211ENST00000533492 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 TTLL13PA6NNM8 815 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 CCDC169A6NNP5 214 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 K7ERI5 159 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 LILRB3O75022 631 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 TADA2AO75478 443 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 WEE2P0C1S8 567 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 GLUD2P49448 558 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 TAS1R1Q7RTX1 841 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 APBB1IPQ7Z5R6 666 aaPredicted RBP17.02■□□□□ 0.32
CPSF1-211ENST00000533492 ZBTB33Q86T24 672 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 FAM122AQ96E09 287 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 FBXL18Q96ME1 805 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 CCDC113Q9H0I3 377 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 POMKQ9H5K3 350 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.32
CPSF1-211ENST00000533492 CDH22Q9UJ99 828 aa17.02■□□□□ 0.32
CPSF1-211ENST00000533492 THP07101 528 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 ADH1AP07327 375 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 CLCN4P51793 760 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 PEX3P56589 373 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 ZXDAP98168 799 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 ATP2C1P98194 919 aaPredicted RBP17.01■□□□□ 0.31
CPSF1-211ENST00000533492 DCAF4L1Q3SXM0 396 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 ATF7IP2Q5U623 682 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 KANK3Q6NY19 840 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 ELMSAN1Q6PJG2 1045 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 TMC5Q6UXY8 1006 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 CDK5RAP3Q96JB5 506 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 DRC1Q96MC2 740 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 SFXN1Q9H9B4 322 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 DPP7Q9UHL4 492 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 ADAM28Q9UKQ2 775 aa17.01■□□□□ 0.31
CPSF1-211ENST00000533492 ARIH1Q9Y4X5 557 aaPredicted RBP17.01■□□□□ 0.31
CPSF1-211ENST00000533492 VWA3AA6NCI4 1184 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 F8W810 466 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 HIP1RO75146 1068 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 RECQL4O94761 1208 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 DSG1Q02413 1049 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 DMP1Q13316 513 aaPredicted RBP17■□□□□ 0.31
CPSF1-211ENST00000533492 TUSC3Q13454 348 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 USP41Q3LFD5 358 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 KIAA0319Q5VV43 1072 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 EEF1DP3Q658K8 133 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 RINT1Q6NUQ1 792 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 FUT10Q6P4F1 479 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 RNF168Q8IYW5 571 aaPredicted RBP17■□□□□ 0.31
CPSF1-211ENST00000533492 RABGGTAQ92696 567 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 MFSD14AQ96MC6 490 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 MMTAG2Q9BU76 263 aaKnown RBP17■□□□□ 0.31
CPSF1-211ENST00000533492 NT5C3AQ9H0P0 336 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms