RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 CHAMP1Q96JM3 812 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 SPATA32Q96LK8 384 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 RPS6KC1Q96S38 1066 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 GAD1Q99259 594 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 MRPL4Q9BYD3 311 aaKnown RBP12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 FZD8Q9H461 694 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 PDZD7Q9H5P4 517 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 C17orf75Q9HAS0 396 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 PARVGQ9HBI0 331 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 TBC1D13Q9NVG8 400 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 FAM13BQ9NYF5 915 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 KLK14Q9P0G3 267 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 ANKFY1Q9P2R3 1169 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 KCNG1Q9UIX4 513 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 ODF2LQ9ULJ1 636 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 RBM19Q9Y4C8 960 aaKnown RBP12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 CDH23Q9H251 3354 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 A0A1B0GUA9 196 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 NT5C1B-RDH14C9J2C7 533 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 C5orf67F2Z3F1 127 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 H0YCG3 227 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 FGF18O76093 207 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 LINC00271P0C7V0 271 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 HOXB3P14651 431 aaPredicted RBP12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 IDEP14735 1019 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 PPM1AP35813 382 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 FAM187BQ17R55 369 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 DCAF4L1Q3SXM0 396 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 ZNF568Q3ZCX4 644 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 ARSHQ5FYA8 562 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 EEF1DP3Q658K8 133 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 KCNT2Q6UVM3 1135 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 AGMOQ6ZNB7 445 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 LRRC55Q6ZSA7 311 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 MRPL10Q7Z7H8 261 aaKnown RBP12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 P2RX5Q93086 422 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 ZFP42Q96MM3 310 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 CWH43Q9H720 699 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 UBN1Q9NPG3 1134 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 LMCD1Q9NZU5 365 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 PLAGL2Q9UPG8 496 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 GDAQ9Y2T3 454 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 ATG2AQ2TAZ0 1938 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 BRWD1Q9NSI6 2320 aa12.6□□□□□ -0.39
UBASH3B-208ENST00000533451 A0A087X0B3 334 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 ARL5CA6NH57 179 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 TULP1O00294 542 aaPredicted RBP12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 OFD1O75665 1012 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 EDN1P05305 212 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 SCNN1GP51170 649 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 BCAR1P56945 870 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 OSTNP61366 133 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 KRT17Q04695 432 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 GIT2Q14161 759 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 NAALADL2Q58DX5 795 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 NT5DC1Q5TFE4 455 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 HAUS6Q7Z4H7 955 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 FAM178BQ8IXR5 827 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 POF1BQ8WVV4 589 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 STAMQ92783 540 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 PPP2R3CQ969Q6 453 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 TMEM169Q96HH4 297 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 TARS2Q9BW92 718 aaKnown RBP12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 LMAN2LQ9H0V9 348 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 NSUN3Q9H649 340 aaKnown RBP12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 IGFLR1Q9H665 355 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 ENTPD7Q9NQZ7 604 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 ARHGAP28Q9P2N2 729 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 KANSL3Q9P2N6 904 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 PUF60Q9UHX1 559 aaKnown RBP12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 PCDHA7Q9UN72 937 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 ZDHHC9Q9Y397 364 aa12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 MORC2Q9Y6X9 1032 aaPredicted RBP12.59□□□□□ -0.39
UBASH3B-208ENST00000533451 HNRNPDLO14979 420 aaKnown RBP12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 TRANK1O15050 2925 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 TRAK2O60296 914 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 MAPTP10636 758 aaKnown RBP12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 POU3F3P20264 500 aaPredicted RBP12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 LIG4P49917 911 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 YARSP54577 528 aaKnown RBP12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 TCEAL5Q5H9L2 206 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 SHC4Q6S5L8 630 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 SFR1Q86XK3 245 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 IQUBQ8NA54 791 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 TMEM87AQ8NBN3 555 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 TMEM161BQ8NDZ6 487 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 SPPL3Q8TCT6 385 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 RSPH1Q8WYR4 309 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 DDX12PQ92771 950 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 TMEM134Q9H6X4 195 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 TLR9Q9NR96 1032 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 SNTG2Q9NY99 539 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 TBC1D7Q9P0N9 293 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 THEGQ9P2T0 379 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms