RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 LRPAP1P30533 357 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 TMEM63BQ5T3F8 832 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 TRIM67Q6ZTA4 783 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 NSMCE4AQ9NXX6 385 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 ARHGAP23Q9P227 1491 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 CYP2J2P51589 502 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 EIF4A1P60842 406 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 INPP5AQ14642 412 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 ZNF658Q5TYW1 1059 aaPredicted RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 KRT25Q7Z3Z0 450 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 MTERF3Q96E29 417 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 MRPL1Q9BYD6 325 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 CYLDQ9NQC7 956 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 C1orf232A0A0U1RR37 186 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 B2RBV5 119 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 FSBPO95073 299 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 PSMC3P17980 439 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 OTUD4Q01804 1114 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 FCHO2Q0JRZ9 810 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 RSRC2Q7L4I2 434 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 ZNF180Q9UJW8 692 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 CPDO75976 1380 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 TLR3O15455 904 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 PCCAP05165 728 aaPredicted RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 PDAP1Q13442 181 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 KYNUQ16719 465 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 IZUMO2Q6UXV1 221 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 B3GNT6Q6ZMB0 384 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 ZNF786Q8N393 782 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 NSL1Q96IY1 281 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 DDX47Q9H0S4 455 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 RANBP17Q9H2T7 1088 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 CD209Q9NNX6 404 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 GALNT8Q9NY28 637 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 KRT38O76015 456 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 FOSL2P15408 326 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 RGS2P41220 211 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 TUBA4AP68366 448 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 SP4Q02446 784 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 KLHL38Q2WGJ6 581 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 TSHZ1Q6ZSZ6 1077 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 DHX40Q8IX18 779 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 LINC00301Q8NCQ3 95 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 P2RX5Q93086 422 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 ZFRQ96KR1 1074 aaKnown RBP8.29□□□□□ -1.08
CSRP1-218ENST00000533402 SENP1Q9P0U3 644 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 ATP6V1HQ9UI12 483 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 UBE4BO95155 1302 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 ABCC6O95255 1503 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 NRKQ7Z2Y5 1582 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 PAX3P23760 479 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 TUBA1BP68363 451 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 NYAP1Q6ZVC0 841 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 TUBA1AQ71U36 451 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 PHF21AQ96BD5 680 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 SLC10A4Q96EP9 437 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 CDHR1Q96JP9 859 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 MMS19Q96T76 1030 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 CHD4Q14839 1912 aa8.29□□□□□ -1.08
CSRP1-218ENST00000533402 CCDC189A1A4V9 331 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 FAM25AB3EWG3 89 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 FAM25CB3EWG5 89 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 FAM25GB3EWG6 89 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 DPYSL4O14531 572 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 EIF2S1P05198 315 aaKnown RBP8.28□□□□□ -1.08
CSRP1-218ENST00000533402 MYBL2P10244 700 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 CBX3Q13185 183 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 OASLQ15646 514 aaKnown RBP8.28□□□□□ -1.08
CSRP1-218ENST00000533402 CCDC142Q17RM4 750 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 IRGCQ6NXR0 463 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 UNC5CLQ8IV45 518 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 MB21D1Q8N884 522 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 LENG1Q96BZ8 264 aaPredicted RBP8.28□□□□□ -1.08
CSRP1-218ENST00000533402 CLEC4MQ9H2X3 399 aaPredicted RBP8.28□□□□□ -1.08
CSRP1-218ENST00000533402 THAP9Q9H5L6 903 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 SLITRK6Q9H5Y7 841 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 SYTL2Q9HCH5 934 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 PANK4Q9NVE7 773 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 SOX13Q9UN79 622 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 GUCY1B2O75343 617 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 PTH1RQ03431 593 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 DMC1Q14565 340 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 GPATCH4Q5T3I0 446 aaKnown RBP8.28□□□□□ -1.08
CSRP1-218ENST00000533402 SCYL2Q6P3W7 929 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 PAGR1Q9BTK6 254 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 KLHL4Q9C0H6 718 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 HERC5Q9UII4 1024 aaKnown RBP8.28□□□□□ -1.08
CSRP1-218ENST00000533402 FBXO9Q9UK97 447 aaPredicted RBP8.28□□□□□ -1.08
CSRP1-218ENST00000533402 CDC27P30260 824 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 RASGRF1Q13972 1273 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 MYBPC2Q14324 1141 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 KRT27Q7Z3Y8 459 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 GRAMD1CQ8IYS0 662 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 MIGA1Q8NAN2 632 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 ORC4O43929 436 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 GAS7O60861 476 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 PLOD1Q02809 727 aaPredicted RBP8.28□□□□□ -1.08
CSRP1-218ENST00000533402 GCKRQ14397 625 aa8.28□□□□□ -1.08
CSRP1-218ENST00000533402 ARMCX4Q5H9R4 360 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms