RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PRKCEQ02156 737 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 SPARCL1Q14515 664 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 HIBCHQ6NVY1 386 aaPredicted RBP16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 TTC39CQ8N584 583 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 USP38Q8NB14 1042 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 CFAP61Q8NHU2 1237 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 FAF2Q96CS3 445 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 ATG4CQ96DT6 458 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 SNF8Q96H20 258 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 HPCAL4Q9UM19 191 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 DUSP10Q9Y6W6 482 aa16.31■□□□□ 0.2
PCDHA3-202ENST00000532566 M0QYV0 167 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 SRGAP2BP0DMP2 458 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 MUTP22033 750 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 KIAA0895Q8NCT3 520 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 HVCN1Q96D96 273 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 UNC45AQ9H3U1 944 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 TMX2Q9Y320 296 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 PRKCBP05771 671 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 MAP2K2P36507 400 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 MDM2Q00987 491 aaPredicted RBP16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 TBX2Q13207 712 aaPredicted RBP16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 TRIM65Q6PJ69 517 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 SCFD1Q8WVM8 642 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 SEPT1Q8WYJ6 367 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 DEFB129Q9H1M3 183 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 TMEM8AQ9HCN3 771 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 SCAF8Q9UPN6 1271 aaKnown RBP16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 CAPN6Q9Y6Q1 641 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 SDC4P31431 198 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 NFX1Q12986 1120 aaKnown RBP16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 MUM1Q2TAK8 710 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 PITPNM3Q9BZ71 974 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 FMN2Q9NZ56 1722 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 AKAP12Q02952 1782 aa16.3■□□□□ 0.2
PCDHA3-202ENST00000532566 ARHGEF37A1IGU5 675 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 RAD51CO43502 376 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 KRT37O76014 449 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 KRT14P02533 472 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 TAP1Q03518 808 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 KRT17Q04695 432 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 E2F4Q16254 413 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 SLC15A2Q16348 729 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 NXNQ6DKJ4 435 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 GBP7Q8N8V2 638 aaPredicted RBP16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 RDM1Q8NG50 284 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 RIN2Q8WYP3 895 aaPredicted RBP16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 TAAR1Q96RJ0 339 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 GOLPH3Q9H4A6 298 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 DDX56Q9NY93 547 aaKnown RBP16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 SLIT3O75094 1523 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 ATRNO75882 1429 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 WDR91A4D1P6 747 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 PON1P27169 355 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 MAGEA9P43362 315 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 GPS1Q13098 491 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 EMC2Q15006 297 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 CFAP36Q96G28 342 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 TRIM51Q9BSJ1 452 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 TXLNGQ9NUQ3 528 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 PCDHB2Q9Y5E7 798 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 IGSF9BQ9UPX0 1349 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 DPEP1P16444 411 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 CYP2C19P33261 490 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 CARSP49589 748 aaKnown RBP16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 Q4G0T1 1027 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 ANGEL2Q5VTE6 544 aaKnown RBP16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 TADA2BQ86TJ2 420 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 BEST2Q8NFU1 509 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 ATL2Q8NHH9 583 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 SUCLA2Q9P2R7 463 aaPredicted RBP16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 ALG6Q9Y672 507 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 PHF2O75151 1096 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 BRAFP15056 766 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 IZUMO3Q5VZ72 239 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 PAPD7Q5XG87 772 aaKnown RBP16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 PNKPQ96T60 521 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 VCXQ9H320 206 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 ARHGAP20Q9P2F6 1191 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 HEY1Q9Y5J3 304 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 PEAK1Q9H792 1746 aa16.29■□□□□ 0.2
PCDHA3-202ENST00000532566 ASB14A6NK59 587 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 RPS12P25398 132 aaKnown RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 HOXA10P31260 410 aaPredicted RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 HERVK_113P62684 666 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 SPOUT1Q5T280 376 aaKnown RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 RAPH1Q70E73 1250 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 SCYL3Q8IZE3 742 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 PNMA5Q96PV4 448 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 RNF181Q9P0P0 153 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 CASP4P49662 377 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 TPD52P55327 224 aaPredicted RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 NCOA4Q13772 614 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 MXD4Q14582 209 aaPredicted RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 NLRP14Q86W24 1093 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms