RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SMYD2Q9NRG4 433 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 PRG3Q9Y2Y8 225 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-221ENST00000532331 ZBED1O96006 694 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 CACNB2Q08289 660 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-221ENST00000532331 PAN2Q504Q3 1202 aaKnown RBP12.04□□□□□ -0.48
PTPRK-221ENST00000532331 ENOSF1Q7L5Y1 443 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 DNERQ8NFT8 737 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 ANKEF1Q9NU02 776 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 INTS9Q9NV88 658 aaKnown RBP12.04□□□□□ -0.48
PTPRK-221ENST00000532331 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 ADCY3O60266 1144 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 CXCR5P32302 372 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 ASPHQ12797 758 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 SPON2Q9BUD6 331 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 BAIAP2L1Q9UHR4 511 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 C2CD2LO14523 706 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 MFAP3LO75121 409 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 CA4P22748 312 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ERVK-9P63128 1117 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ERVK-24P63145 666 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 C2orf54Q08AI8 447 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 NME3Q13232 169 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 DDX53Q86TM3 631 aaKnown RBP12.03□□□□□ -0.48
PTPRK-221ENST00000532331 BCAS4Q8TDM0 211 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 PDE11AQ9HCR9 933 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 KIF20BQ96Q89 1820 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 GOLGA8QA0A0J9YX86 632 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 GOLGA8OA6NCC3 632 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 GOLGA8NF8WBI6 632 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ZSCAN26Q16670 478 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 DCAF4L1Q3SXM0 396 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 CYP4F22Q6NT55 531 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 FBXL13Q8NEE6 735 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ATP8A1Q9Y2Q0 1164 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 PMLP29590 882 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ACOT2P49753 483 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 CDK17Q00537 523 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 SLMAPQ14BN4 828 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 IFT43Q96FT9 208 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 IDI2Q9BXS1 227 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ZMYND12Q9H0C1 365 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ADAMTS1Q9UHI8 967 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ATP8B1O43520 1251 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 CREB3O43889 395 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 MSCO60682 206 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ATP1A3P13637 1013 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 PCSK1P29120 753 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 RWDD2BP57060 319 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 PHLDB3Q6NSJ2 640 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 INTS2Q9H0H0 1204 aaKnown RBP12.03□□□□□ -0.48
PTPRK-221ENST00000532331 CEP72Q9P209 647 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 MAP3K7O43318 606 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 KPNA2P52292 529 aaKnown RBP12.03□□□□□ -0.48
PTPRK-221ENST00000532331 PSMC1P62191 440 aaKnown RBP12.03□□□□□ -0.48
PTPRK-221ENST00000532331 EFHC2Q5JST6 749 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 LMBRD2Q68DH5 695 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-221ENST00000532331 SDE2Q6IQ49 451 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 SH3BP1Q9Y3L3 701 aa12.03□□□□□ -0.48
PTPRK-221ENST00000532331 LCP1P13796 627 aa12.02□□□□□ -0.48
PTPRK-221ENST00000532331 CASP1P29466 404 aa12.02□□□□□ -0.48
PTPRK-221ENST00000532331 JADE1Q6IE81 842 aa12.02□□□□□ -0.48
PTPRK-221ENST00000532331 MMTAG2Q9BU76 263 aaKnown RBP12.02□□□□□ -0.48
PTPRK-221ENST00000532331 PCDHB12Q9Y5F1 795 aa12.02□□□□□ -0.48
PTPRK-221ENST00000532331 CNTNAP5Q8WYK1 1306 aa12.02□□□□□ -0.48
PTPRK-221ENST00000532331 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.48
PTPRK-221ENST00000532331 NPHP3-ACAD11A0A0J9YXS1 232 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 LLGL1Q15334 1064 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 MMEL1Q495T6 779 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
PTPRK-221ENST00000532331 ATP6V1E2Q96A05 226 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 HTATIP2Q9BUP3 242 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 HSPBP1Q9NZL4 362 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 FZD1Q9UP38 647 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 H7C4K7 107 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 KCTD16Q68DU8 428 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 MYLK4Q86YV6 388 aaPredicted RBP12.02□□□□□ -0.49
PTPRK-221ENST00000532331 GUF1Q8N442 669 aaKnown RBP12.02□□□□□ -0.49
PTPRK-221ENST00000532331 SP110Q9HB58 689 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 PXMP2Q9NR77 195 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
PTPRK-221ENST00000532331 CNOT8Q9UFF9 292 aaKnown RBP12.02□□□□□ -0.49
PTPRK-221ENST00000532331 TLK1Q9UKI8 766 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 EMSYQ7Z589 1322 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 LGALS16A8MUM7 142 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 SUN1O94901 812 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 SOX5P35711 763 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 PRCPP42785 496 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 MCUQ8NE86 351 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 SIK2Q9H0K1 926 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 VTA1Q9NP79 307 aa12.02□□□□□ -0.49
PTPRK-221ENST00000532331 TRIM49BA6NDI0 452 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 VWA5AO00534 786 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 OAZ1P54368 228 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 DHX9Q08211 1270 aaKnown RBP12.01□□□□□ -0.49
PTPRK-221ENST00000532331 IQCB1Q15051 598 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 DBN1Q16643 649 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms