RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 RASA4O43374 803 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 FOSP01100 380 aaPredicted RBP3.73□□□□□ -1.81
CD44-234ENST00000531873 GAAP10253 952 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 HNRNPLP14866 589 aaKnown RBP eCLIP3.73□□□□□ -1.81
CD44-234ENST00000531873 ZKSCAN1P17029 563 aaPredicted RBP3.73□□□□□ -1.81
CD44-234ENST00000531873 PRIM2P49643 509 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 STAT5BP51692 787 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 NKX6-1P78426 367 aaPredicted RBP3.73□□□□□ -1.81
CD44-234ENST00000531873 SRSF3P84103 164 aaKnown RBP3.73□□□□□ -1.81
CD44-234ENST00000531873 CDC42EP1Q00587 391 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 POLD3Q15054 466 aaPredicted RBP3.73□□□□□ -1.81
CD44-234ENST00000531873 ATG14Q6ZNE5 492 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 DAAM2Q86T65 1068 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 LDHDQ86WU2 507 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 SKAP1Q86WV1 359 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 IGDCC3Q8IVU1 814 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 DRC7Q8IY82 874 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 FAM186BQ8IYM0 893 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 UNC5BQ8IZJ1 945 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 MSL3Q8N5Y2 521 aaKnown RBP3.73□□□□□ -1.81
CD44-234ENST00000531873 LINC00482Q8N8I6 264 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 ZNF526Q8TF50 670 aaPredicted RBP3.73□□□□□ -1.81
CD44-234ENST00000531873 ZCCHC14Q8WYQ9 949 aaKnown RBP3.73□□□□□ -1.81
CD44-234ENST00000531873 PAWRQ96IZ0 340 aaKnown RBP3.73□□□□□ -1.81
CD44-234ENST00000531873 TNIP3Q96KP6 325 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 MYD88Q99836 296 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 OSBPL6Q9BZF3 934 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 KMT5AQ9NQR1 393 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 RTEL1Q9NZ71 1219 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 Q9UFV3 132 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 DMTF1Q9Y222 760 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 RPTORQ8N122 1335 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 WNT10BO00744 389 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 SLC16A6O15403 523 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 FRS3O43559 492 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 AKR1B10O60218 316 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 TCEA3O75764 348 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 ENDOD1O94919 500 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 PLA2G1BP04054 148 aaKnown RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 LTA4HP09960 611 aaKnown RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 MYF5P13349 255 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 PIK3CBP42338 1070 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 CASP5P51878 434 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 EPHB3P54753 998 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 STK3Q13188 491 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 TOP3AQ13472 1001 aaPredicted RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 KRT72Q14CN4 511 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 EIF4HQ15056 248 aaKnown RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 TARBP2Q15633 366 aaKnown RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 WDR72Q3MJ13 1102 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 INO80DQ53TQ3 878 aaPredicted RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 PRR31Q5SQ13 230 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 PPP4R3AQ6IN85 833 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 DPP8Q6V1X1 898 aaPredicted RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 OTOP2Q7RTS6 562 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 TTC7BQ86TV6 843 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 RHOT1Q8IXI2 618 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 IFNL2Q8IZJ0 200 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 ZGPATQ8N5A5 531 aaKnown RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 WDR48Q8TAF3 677 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 IFI44Q8TCB0 444 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 SNX33Q8WV41 574 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 PGBD4Q96DM1 585 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 CDK5RAP3Q96JB5 506 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 WDR92Q96MX6 357 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 CLIC6Q96NY7 704 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 TBCBQ99426 244 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 C7orf25Q9BPX7 421 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 PDCD2LQ9BRP1 358 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 MCOLN1Q9GZU1 580 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 BTBD1Q9H0C5 482 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 NSUN3Q9H649 340 aaKnown RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 PPCSQ9HAB8 311 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 KCNK12Q9HB15 430 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 DCP1AQ9NPI6 582 aaPredicted RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 SAE1Q9UBE0 346 aaPredicted RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 STAP2Q9UGK3 403 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 CROTQ9UKG9 612 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 CDC42EP3Q9UKI2 254 aa3.72□□□□□ -1.81
CD44-234ENST00000531873 SMG5Q9UPR3 1016 aaKnown RBP3.72□□□□□ -1.81
CD44-234ENST00000531873 A0A0G2JLL6 359 aaPredicted RBP3.71□□□□□ -1.82
CD44-234ENST00000531873 CFAP69A5D8W1 941 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 TCAF2A6NFQ2 919 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 H0Y858 1186 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 MYO1FO00160 1098 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 ADCY6O43306 1168 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 PEX10O60683 326 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 PRAMEF4O60810 478 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 KLHL18O94889 574 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 AMY1AP04745 511 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 CHGBP05060 677 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 SETSIPP0DME0 302 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 SYN1P17600 705 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 ECHS1P30084 290 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 ADSLP30566 484 aaPredicted RBP3.71□□□□□ -1.82
CD44-234ENST00000531873 SREBF1P36956 1147 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 ETV4P43268 484 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 LIMS1P48059 325 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 MLLT6P55198 1093 aaPredicted RBP3.71□□□□□ -1.82
CD44-234ENST00000531873 LINC00310P59036 64 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms