RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 SYT11Q9BT88 431 aa11.85□□□□□ -0.51
SRPRA-205ENST00000531104 MRPL4Q9BYD3 311 aaKnown RBP11.85□□□□□ -0.51
SRPRA-205ENST00000531104 IRX2Q9BZI1 471 aaPredicted RBP11.85□□□□□ -0.51
SRPRA-205ENST00000531104 LACRTQ9GZZ8 138 aa11.85□□□□□ -0.51
SRPRA-205ENST00000531104 TUT1Q9H6E5 874 aaKnown RBP11.85□□□□□ -0.51
SRPRA-205ENST00000531104 GPBP1L1Q9HC44 474 aaPredicted RBP11.85□□□□□ -0.51
SRPRA-205ENST00000531104 PTPRHQ9HD43 1115 aa11.85□□□□□ -0.51
SRPRA-205ENST00000531104 CNTNAP2Q9UHC6 1331 aa11.85□□□□□ -0.51
SRPRA-205ENST00000531104 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 HAS3O00219 553 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 ACKR2O00590 384 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 AKR1B10O60218 316 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 KIF5CO60282 957 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 TOM1L1O75674 476 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 GFPT2O94808 682 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 F2P00734 622 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 PRKCBP05771 671 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 SRGAP2CP0DJJ0 459 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 CASQ1P31415 396 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 WNT7BP56706 349 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 NLRP11P59045 1033 aaKnown RBP11.84□□□□□ -0.51
SRPRA-205ENST00000531104 CYP27A1Q02318 531 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 MBTD1Q05BQ5 628 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 MCL1Q07820 350 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 KLHL30Q0D2K2 578 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 GRM1Q13255 1194 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 DRAP1Q14919 205 aaPredicted RBP11.84□□□□□ -0.51
SRPRA-205ENST00000531104 SPA17Q15506 151 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 SLC18A3Q16572 532 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 MAPK6Q16659 721 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 ZNF571Q7Z3V5 609 aaPredicted RBP11.84□□□□□ -0.51
SRPRA-205ENST00000531104 RHPN2Q8IUC4 686 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 ARHGEF19Q8IW93 802 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 ZNF516Q92618 1163 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 KAT2BQ92831 832 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 SEMA4DQ92854 862 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 TSGA10Q9BZW7 698 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 IFT122Q9HBG6 1241 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 TRIM10Q9UDY6 481 aa11.84□□□□□ -0.51
SRPRA-205ENST00000531104 ABT1Q9ULW3 272 aaKnown RBP11.84□□□□□ -0.51
SRPRA-205ENST00000531104 DOCK3Q8IZD9 2030 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 UQCRHLA0A096LP55 91 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 RRN3P2A6NIE6 340 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 TNPO2O14787 897 aaKnown RBP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 DYNC1LI2O43237 492 aaPredicted RBP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 KRT86O43790 486 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 ZC3H11AO75152 810 aaKnown RBP eCLIP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 LRRN2O75325 713 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 IPO7O95373 1038 aaKnown RBP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 ALDH1A1P00352 501 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 C4BPAP04003 597 aaKnown RBP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 UQCRHP07919 91 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 GJB1P08034 283 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 CYP2B6P20813 491 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 CYP2C19P33261 490 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 MAGEA1P43355 309 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 NKX3-2P78367 333 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 PTK2Q05397 1052 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 GFPT1Q06210 699 aaPredicted RBP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 KIF22Q14807 665 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 GRIK4Q16099 956 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 AMHR2Q16671 573 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 ZACNQ401N2 412 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 TDRD12Q587J7 1177 aaKnown RBP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 ZNF569Q5MCW4 686 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 ZBTB41Q5SVQ8 909 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 C10orf76Q5T2E6 689 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 SV2AQ7L0J3 742 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 KIAA1328Q86T90 577 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 TLK2Q86UE8 772 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 SLC35F6Q8N357 371 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 SLC30A5Q8TAD4 765 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 HELQQ8TDG4 1101 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 CCDC127Q96BQ5 260 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 ZBTB10Q96DT7 871 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 POP1Q99575 1024 aaKnown RBP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 CGRRF1Q99675 332 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 MSTO1Q9BUK6 570 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 DEF6Q9H4E7 631 aa11.83□□□□□ -0.52
SRPRA-205ENST00000531104 TOPORSQ9NS56 1045 aaPredicted RBP11.83□□□□□ -0.52
SRPRA-205ENST00000531104 A0A087X0T9 212 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 MBLAC1A4D2B0 266 aaPredicted RBP11.82□□□□□ -0.52
SRPRA-205ENST00000531104 BTNL10A8MVZ5 291 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 OGTO15294 1046 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 EVI5O60447 810 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 FAM228BP0C875 321 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 ACOT2P49753 483 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 FCGRTP55899 365 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 IGBP1P78318 339 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 ADAM17P78536 824 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 POU5F1Q01860 360 aaKnown RBP11.82□□□□□ -0.52
SRPRA-205ENST00000531104 MAP2K1Q02750 393 aaPredicted RBP11.82□□□□□ -0.52
SRPRA-205ENST00000531104 PPFIA1Q13136 1202 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 CCDC122Q5T0U0 273 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 CYP4F22Q6NT55 531 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 MPZL3Q6UWV2 235 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 BRSK2Q8IWQ3 736 aa11.82□□□□□ -0.52
SRPRA-205ENST00000531104 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms