RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 RINT1Q6NUQ1 792 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 C1orf186Q6ZWK4 172 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 LEO1Q8WVC0 666 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-221ENST00000531068 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 MMTAG2Q9BU76 263 aaKnown RBP12.1□□□□□ -0.47
CAPN1-221ENST00000531068 COLEC11Q9BWP8 271 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 APOL6Q9BWW8 343 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 KCND2Q9NZV8 630 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 SSX2IPQ9Y2D8 614 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 HES2Q9Y543 173 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 IRAK3Q9Y616 596 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 ZMYM2Q9UBW7 1377 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 MYH9P35579 1960 aaKnown RBP12.09□□□□□ -0.47
CAPN1-221ENST00000531068 HIP1RO75146 1068 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 MBD3O95983 291 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
CAPN1-221ENST00000531068 LIG1P18858 919 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 AKAP5P24588 427 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 GUCY2CP25092 1073 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
CAPN1-221ENST00000531068 OR1G1P47890 313 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 SMTNP53814 917 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 PEX3P56589 373 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 ZNF445P59923 1031 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 DCAF4L1Q3SXM0 396 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 FOXD4L6Q3SYB3 417 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-221ENST00000531068 TPRNQ4KMQ1 711 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 FOXD4L3Q6VB84 417 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-221ENST00000531068 CABP7Q86V35 215 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 PPFIBP1Q86W92 1011 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 SYT2Q8N9I0 419 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-221ENST00000531068 LINC00301Q8NCQ3 95 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 SMRP1Q8NCR6 262 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 CASP10Q92851 521 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 CALML4Q96GE6 196 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 RPS6KC1Q96S38 1066 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 NTPCRQ9BSD7 190 aaKnown RBP12.09□□□□□ -0.47
CAPN1-221ENST00000531068 EMILIN2Q9BXX0 1053 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 CCDC113Q9H0I3 377 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 ZBP1Q9H171 429 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 NXF3Q9H4D5 531 aaKnown RBP12.09□□□□□ -0.47
CAPN1-221ENST00000531068 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 GDPD2Q9HCC8 539 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 BARX2Q9UMQ3 279 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-221ENST00000531068 CUL9Q8IWT3 2517 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 SIP14410 1827 aa12.09□□□□□ -0.47
CAPN1-221ENST00000531068 TTC28Q96AY4 2481 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 CLASP2O75122 1294 aaKnown RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 GADD45BO75293 160 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 PRPF40AO75400 957 aaKnown RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 GLP2RO95838 553 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 ALADP13716 330 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 NPTX2P47972 431 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 SCNN1GP51170 649 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 KRT85P78386 507 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 DSC1Q08554 894 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 GRIK3Q13003 919 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 KCNC3Q14003 757 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 SF3A1Q15459 793 aaKnown RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 ATF7IP2Q5U623 682 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 ANKRD54Q6NXT1 300 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 TMEM173Q86WV6 379 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 CDR2LQ86X02 465 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 GPT2Q8TD30 523 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 ZFP42Q96MM3 310 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 ZNF396Q96N95 335 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 SCAND2PQ9GZW5 306 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 PDZD7Q9H5P4 517 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 POLD4Q9HCU8 107 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 KMT5AQ9NQR1 393 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 MRPL17Q9NRX2 175 aaKnown RBP12.08□□□□□ -0.48
CAPN1-221ENST00000531068 MIOSQ9NXC5 875 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 TNFSF13BQ9Y275 285 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 CLIC4Q9Y696 253 aa12.08□□□□□ -0.48
CAPN1-221ENST00000531068 XIRP2A4UGR9 3374 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 VCANP13611 3396 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 PI4K2BG5E9Z4 385 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 H0YCG3 227 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 YEATS4O95619 227 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 SOD2P04179 222 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 PLA2G4BP0C869 781 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 KLRC2P26717 231 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 ZP2Q05996 745 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 ITIH3Q06033 890 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 SLC39A14Q15043 492 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 TMEM119Q4V9L6 283 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 KIAA1841Q6NSI8 718 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 CES5AQ6NT32 575 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 LLGL2Q6P1M3 1020 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 KCNK18Q7Z418 384 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 DAW1Q8N136 415 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 VN1R2Q8NFZ6 395 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 RASSF8Q8NHQ8 419 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 BCL7CQ8WUZ0 217 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-221ENST00000531068 EVPLQ92817 2033 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms