RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 SNRNP48Q6IEG0 339 aaKnown RBP18.54■□□□□ 0.56
BRCA2-204ENST00000530893 NOP9Q86U38 636 aaKnown RBP18.54■□□□□ 0.56
BRCA2-204ENST00000530893 MICALL2Q8IY33 904 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 ZSWIM1Q9BR11 485 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 PDLIM7Q9NR12 457 aa18.54■□□□□ 0.56
BRCA2-204ENST00000530893 BRCA1P38398 1863 aaKnown RBP18.53■□□□□ 0.56
BRCA2-204ENST00000530893 GRIN2DO15399 1336 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 KIAA1217Q5T5P2 1943 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 DAPK3O43293 454 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 STBD1O95210 358 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 PTPRAP18433 802 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 PDE6CP51160 858 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 DRG2P55039 364 aaKnown RBP18.53■□□□□ 0.56
BRCA2-204ENST00000530893 GNGT1P63211 74 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 DR1Q01658 176 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 CDR2Q01850 454 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 NBPF12Q5TAG4 269 aaPredicted RBP18.53■□□□□ 0.56
BRCA2-204ENST00000530893 RUFY4Q6ZNE9 571 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 HELQQ8TDG4 1101 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 KCNN1Q92952 543 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 TMBIM4Q9HC24 238 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 JPH1Q9HDC5 661 aaPredicted RBP18.53■□□□□ 0.56
BRCA2-204ENST00000530893 RAB20Q9NX57 234 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 UVRAGQ9P2Y5 699 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 GTF3C4Q9UKN8 822 aa18.53■□□□□ 0.56
BRCA2-204ENST00000530893 ZNF214Q9UL59 606 aaPredicted RBP18.53■□□□□ 0.56
BRCA2-204ENST00000530893 RRP15Q9Y3B9 282 aaKnown RBP18.53■□□□□ 0.56
BRCA2-204ENST00000530893 NFKBIEO00221 500 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 ZNF862O60290 1169 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 ZEB2O60315 1214 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 MYZAPP0CAP1 466 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 GBP1P32455 592 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 CYP24A1Q07973 514 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 GNPTABQ3T906 1256 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 DNAJC21Q5F1R6 531 aaKnown RBP18.52■□□□□ 0.56
BRCA2-204ENST00000530893 CEP85LQ5SZL2 805 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 DDX42Q86XP3 938 aaKnown RBP eCLIP18.52■□□□□ 0.56
BRCA2-204ENST00000530893 GPD1LQ8N335 351 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 POMGNT1Q8WZA1 660 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 ALG3Q92685 438 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 SEMA4DQ92854 862 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 KAT5Q92993 513 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 CCDC127Q96BQ5 260 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 SAAL1Q96ER3 474 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 PCDHB18PQ96TA0 734 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 KIAA1586Q9HCI6 787 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 RASAL2Q9UJF2 1139 aa18.52■□□□□ 0.56
BRCA2-204ENST00000530893 H0YGN5 161 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 CYP26A1O43174 497 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 ERLIN2O94905 339 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 CYP1A2P05177 515 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 CYP11B1P15538 503 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 NR1D1P20393 614 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 CHRNA3P32297 505 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 CTNNA1P35221 906 aaKnown RBP18.52■□□□□ 0.55
BRCA2-204ENST00000530893 GMPSP49915 693 aaPredicted RBP18.52■□□□□ 0.55
BRCA2-204ENST00000530893 FMO1Q01740 532 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 GCNT1Q02742 428 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 BIRC3Q13489 604 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 TMC3Q7Z5M5 1100 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 ARFGAP2Q8N6H7 521 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 WNK4Q96J92 1243 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 IFT74Q96LB3 600 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 ERP44Q9BS26 406 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 NEUROG2Q9H2A3 272 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 SLC9A2Q9UBY0 812 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 RSPH14Q9UHP6 348 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 CNOT7Q9UIV1 285 aaKnown RBP18.52■□□□□ 0.55
BRCA2-204ENST00000530893 NFS1Q9Y697 457 aa18.52■□□□□ 0.55
BRCA2-204ENST00000530893 KIAA0391O15091 583 aaKnown RBP18.51■□□□□ 0.55
BRCA2-204ENST00000530893 UAP1Q16222 522 aaPredicted RBP18.51■□□□□ 0.55
BRCA2-204ENST00000530893 KCTD16Q68DU8 428 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 DUPD1Q68J44 220 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 SLC39A4Q6P5W5 647 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 FOXR1Q6PIV2 292 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 SAMD7Q7Z3H4 446 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 SLC47A2Q86VL8 602 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 BSNDQ8WZ55 320 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 RUNDC3BQ96NL0 473 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 TEX13BQ9BXU2 312 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 FAM107BQ9H098 131 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 ACAD9Q9H845 621 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 ATP6V0A4Q9HBG4 840 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 BCS1LQ9Y276 419 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 LTBP3Q9NS15 1303 aa18.51■□□□□ 0.55
BRCA2-204ENST00000530893 SRRM3A6NNA2 597 aaPredicted RBP18.5■□□□□ 0.55
BRCA2-204ENST00000530893 TULP1O00294 542 aaPredicted RBP18.5■□□□□ 0.55
BRCA2-204ENST00000530893 HNRNPDLO14979 420 aaKnown RBP18.5■□□□□ 0.55
BRCA2-204ENST00000530893 RGS20O76081 388 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 PEX5P50542 639 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 SEL1L2Q5TEA6 688 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 SWSAP1Q6NVH7 229 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 SV2AQ7L0J3 742 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 TRMT1LQ7Z2T5 733 aaKnown RBP18.5■□□□□ 0.55
BRCA2-204ENST00000530893 APOBEC3FQ8IUX4 373 aaKnown RBP18.5■□□□□ 0.55
BRCA2-204ENST00000530893 BCAS4Q8TDM0 211 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 CD101Q93033 1021 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 KIFC3Q9BVG8 833 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 CELF4Q9BZC1 486 aaKnown RBP18.5■□□□□ 0.55
BRCA2-204ENST00000530893 CYP26B1Q9NR63 512 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms