RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 TCHHQ07283 1943 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 PRR33A8MZF0 331 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 K7ERI5 159 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 KIAA0391O15091 583 aaKnown RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 EIF3DO15371 548 aaKnown RBP eCLIP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 MBTPS2O43462 519 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 ACTN4O43707 911 aaKnown RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 CALUO43852 315 aaPredicted RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 MGEA5O60502 916 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 UPP2O95045 317 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 GCNT3O95395 438 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 C22orf31O95567 290 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 ZSCAN20P17040 1043 aaPredicted RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 LIG1P18858 919 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 ATP4AP20648 1035 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 RPL13P26373 211 aaKnown RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 CD52P31358 61 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 BMPR1AP36894 532 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 MATR3P43243 847 aaKnown RBP eCLIP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 GATMP50440 423 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 CRYBB1P53674 252 aaPredicted RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 NPEPPSP55786 919 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 PEX3P56589 373 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 KCNC3Q14003 757 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 TARBP2Q15633 366 aaKnown RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 SMAD2Q15796 467 aaKnown RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 E2F4Q16254 413 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 STX1AQ16623 288 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 TIGD5Q53EQ6 642 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 NAALADL2Q58DX5 795 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 FAM26FQ5R3K3 315 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 SLFN12LQ6IEE8 588 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 C1orf186Q6ZWK4 172 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 MAEAQ7L5Y9 396 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 ADGRD2Q7Z7M1 963 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 MLKLQ8NB16 471 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 RNF149Q8NC42 400 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 VN1R2Q8NFZ6 395 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 TRAPPC12Q8WVT3 735 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 TMEM40Q8WWA1 233 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 DNAJB3Q8WWF6 145 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 SPIRE2Q8WWL2 714 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 APBB2Q92870 758 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 FAM122AQ96E09 287 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 CCDC51Q96ER9 411 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 PNMA5Q96PV4 448 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 ACCSQ96QU6 501 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 YME1L1Q96TA2 773 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 REEP2Q9BRK0 252 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 FTHL17Q9BXU8 183 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 NFKBIZQ9BYH8 718 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 TRIM6Q9C030 488 aaPredicted RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 FAM49AQ9H0Q0 323 aaPredicted RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 GOLPH3LQ9H4A5 285 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 NSUN3Q9H649 340 aaKnown RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 OLFML3Q9NRN5 406 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 BLOC1S4Q9NUP1 217 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 RNF19AQ9NV58 838 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 PRMT7Q9NVM4 692 aaPredicted RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 CLEC1BQ9P126 229 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 KIAA1468Q9P260 1216 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 GINS2Q9Y248 185 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 PCDHGC5Q9Y5F6 944 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 CDY2AQ9Y6F7 541 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 MRPL42Q9Y6G3 142 aaKnown RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 SQORQ9Y6N5 450 aa5.25□□□□□ -1.57
SSBP3-213ENST00000530618 MTCL1Q9Y4B5 1905 aaKnown RBP5.25□□□□□ -1.57
SSBP3-213ENST00000530618 FANCMQ8IYD8 2048 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 IGKV6-21A0A0C4DH24 114 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 DENND3A2RUS2 1198 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 CARNS1A5YM72 827 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 MYMKA6NI61 221 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 SMTNL1A8MU46 457 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 BECN2A8MW95 431 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 GOLGA6L19H0YKK7 550 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 INO80B-WBP1J3KQ70 363 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 HNRNPDLO14979 420 aaKnown RBP5.24□□□□□ -1.57
SSBP3-213ENST00000530618 N4BP3O15049 544 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 GADD45BO75293 160 aaPredicted RBP5.24□□□□□ -1.57
SSBP3-213ENST00000530618 RPS6KA5O75582 802 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 RHOBTB3O94955 611 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 LDHAP00338 332 aaKnown RBP5.24□□□□□ -1.57
SSBP3-213ENST00000530618 ITGB1P05556 798 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 RB1P06400 928 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 SRGAP2CP0DJJ0 459 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 CTNNB1P35222 781 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 LIG4P49917 911 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 CLCN3P51790 818 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 ZNF131P52739 623 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 MRPS6P82932 125 aaKnown RBP5.24□□□□□ -1.57
SSBP3-213ENST00000530618 RBM10P98175 930 aaKnown RBP5.24□□□□□ -1.57
SSBP3-213ENST00000530618 RAD51AP2Q09MP3 1159 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 LAMTOR4Q0VGL1 99 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 DPYDQ12882 1025 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 COASYQ13057 564 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 PAK2Q13177 524 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 ADAM15Q13444 863 aa5.24□□□□□ -1.57
SSBP3-213ENST00000530618 SNW1Q13573 536 aaKnown RBP5.24□□□□□ -1.57
SSBP3-213ENST00000530618 GIT2Q14161 759 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms