RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 CLIP2Q9UDT6 1046 aa8.83□□□□□ -1
POLB-216ENST00000530566 CCPG1Q9ULG6 757 aa8.83□□□□□ -1
POLB-216ENST00000530566 MTMR7Q9Y216 660 aa8.83□□□□□ -1
POLB-216ENST00000530566 HIF3AQ9Y2N7 669 aa8.83□□□□□ -1
POLB-216ENST00000530566 MYO5AQ9Y4I1 1855 aaKnown RBP8.83□□□□□ -1
POLB-216ENST00000530566 MYH7BA7E2Y1 1941 aa8.82□□□□□ -1
POLB-216ENST00000530566 KRTAP9-6A0A140TA67 174 aa8.82□□□□□ -1
POLB-216ENST00000530566 KIAA1324LA8MWY0 1029 aaPredicted RBP8.82□□□□□ -1
POLB-216ENST00000530566 ARHGAP6O43182 974 aa8.82□□□□□ -1
POLB-216ENST00000530566 TREHO43280 583 aa8.82□□□□□ -1
POLB-216ENST00000530566 ADAM11O75078 769 aa8.82□□□□□ -1
POLB-216ENST00000530566 TOP3BO95985 862 aaKnown RBP8.82□□□□□ -1
POLB-216ENST00000530566 TGFB1P01137 390 aa8.82□□□□□ -1
POLB-216ENST00000530566 BMP3P12645 472 aa8.82□□□□□ -1
POLB-216ENST00000530566 PLA2G2AP14555 144 aa8.82□□□□□ -1
POLB-216ENST00000530566 MAGEA9P43362 315 aa8.82□□□□□ -1
POLB-216ENST00000530566 EIF1AXP47813 144 aaKnown RBP8.82□□□□□ -1
POLB-216ENST00000530566 STARD6P59095 220 aa8.82□□□□□ -1
POLB-216ENST00000530566 STPG1Q5TH74 334 aa8.82□□□□□ -1
POLB-216ENST00000530566 MCTP1Q6DN14 999 aa8.82□□□□□ -1
POLB-216ENST00000530566 FDX2Q6P4F2 183 aa8.82□□□□□ -1
POLB-216ENST00000530566 C16orf86Q6ZW13 317 aa8.82□□□□□ -1
POLB-216ENST00000530566 TMC7Q7Z402 723 aa8.82□□□□□ -1
POLB-216ENST00000530566 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.82□□□□□ -1
POLB-216ENST00000530566 FAM160B2Q86V87 743 aa8.82□□□□□ -1
POLB-216ENST00000530566 TRIM42Q8IWZ5 723 aa8.82□□□□□ -1
POLB-216ENST00000530566 MRPS27Q92552 414 aaKnown RBP8.82□□□□□ -1
POLB-216ENST00000530566 HDAC5Q9UQL6 1122 aa8.82□□□□□ -1
POLB-216ENST00000530566 LZTS1Q9Y250 596 aa8.82□□□□□ -1
POLB-216ENST00000530566 HECTD1Q9ULT8 2610 aa8.82□□□□□ -1
POLB-216ENST00000530566 CYP2D7A0A087X1C5 515 aa8.81□□□□□ -1
POLB-216ENST00000530566 KANSL1LA0AUZ9 987 aa8.81□□□□□ -1
POLB-216ENST00000530566 EDNRBP24530 442 aa8.81□□□□□ -1
POLB-216ENST00000530566 CA8P35219 290 aa8.81□□□□□ -1
POLB-216ENST00000530566 GATMP50440 423 aa8.81□□□□□ -1
POLB-216ENST00000530566 SNAP25P60880 206 aa8.81□□□□□ -1
POLB-216ENST00000530566 EHHADHQ08426 723 aa8.81□□□□□ -1
POLB-216ENST00000530566 AAMPQ13685 434 aa8.81□□□□□ -1
POLB-216ENST00000530566 SIM2Q14190 667 aaPredicted RBP8.81□□□□□ -1
POLB-216ENST00000530566 UBXN2BQ14CS0 331 aa8.81□□□□□ -1
POLB-216ENST00000530566 TMC5Q6UXY8 1006 aa8.81□□□□□ -1
POLB-216ENST00000530566 SEPT14Q6ZU15 432 aa8.81□□□□□ -1
POLB-216ENST00000530566 RASGRP2Q7LDG7 609 aa8.81□□□□□ -1
POLB-216ENST00000530566 ZNF605Q86T29 641 aa8.81□□□□□ -1
POLB-216ENST00000530566 ZDHHC13Q8IUH4 622 aa8.81□□□□□ -1
POLB-216ENST00000530566 FAM20CQ8IXL6 584 aa8.81□□□□□ -1
POLB-216ENST00000530566 TMEFF1Q8IYR6 380 aa8.81□□□□□ -1
POLB-216ENST00000530566 TMEM102Q8N9M5 508 aaPredicted RBP8.81□□□□□ -1
POLB-216ENST00000530566 SLC7A3Q8WY07 619 aa8.81□□□□□ -1
POLB-216ENST00000530566 NXPE3Q969Y0 559 aa8.81□□□□□ -1
POLB-216ENST00000530566 FAM83CQ9BQN1 747 aa8.81□□□□□ -1
POLB-216ENST00000530566 RUSC1Q9BVN2 902 aa8.81□□□□□ -1
POLB-216ENST00000530566 KCNF1Q9H3M0 494 aa8.81□□□□□ -1
POLB-216ENST00000530566 RAI2Q9Y5P3 530 aa8.81□□□□□ -1
POLB-216ENST00000530566 LCTP09848 1927 aa8.81□□□□□ -1
POLB-216ENST00000530566 LAMA5O15230 3695 aa8.81□□□□□ -1
POLB-216ENST00000530566 FRMPD2Q68DX3 1309 aaPredicted RBP8.8□□□□□ -1
POLB-216ENST00000530566 PATJQ8NI35 1801 aa8.8□□□□□ -1
POLB-216ENST00000530566 HMX2A2RU54 273 aa8.8□□□□□ -1
POLB-216ENST00000530566 FAM170BA6NMN3 283 aa8.8□□□□□ -1
POLB-216ENST00000530566 SRGAP3O43295 1099 aa8.8□□□□□ -1
POLB-216ENST00000530566 EIF4EBP3O60516 100 aaPredicted RBP8.8□□□□□ -1
POLB-216ENST00000530566 CLASP2O75122 1294 aaKnown RBP8.8□□□□□ -1
POLB-216ENST00000530566 EDN3P14138 238 aa8.8□□□□□ -1
POLB-216ENST00000530566 MPSTP25325 297 aa8.8□□□□□ -1
POLB-216ENST00000530566 GBP2P32456 591 aaPredicted RBP8.8□□□□□ -1
POLB-216ENST00000530566 NLRP12P59046 1061 aa8.8□□□□□ -1
POLB-216ENST00000530566 SMC1AQ14683 1233 aaKnown RBP8.8□□□□□ -1
POLB-216ENST00000530566 C12orf60Q5U649 245 aa8.8□□□□□ -1
POLB-216ENST00000530566 SLFN13Q68D06 897 aa8.8□□□□□ -1
POLB-216ENST00000530566 PROSER1Q86XN7 944 aa8.8□□□□□ -1
POLB-216ENST00000530566 MRPL43Q8N983 215 aaKnown RBP8.8□□□□□ -1
POLB-216ENST00000530566 COLGALT1Q8NBJ5 622 aa8.8□□□□□ -1
POLB-216ENST00000530566 TMEM87AQ8NBN3 555 aa8.8□□□□□ -1
POLB-216ENST00000530566 PPTC7Q8NI37 304 aa8.8□□□□□ -1
POLB-216ENST00000530566 ZNF512BQ96KM6 892 aaPredicted RBP8.8□□□□□ -1
POLB-216ENST00000530566 PTPRCP08575 1304 aa8.8□□□□□ -1
POLB-216ENST00000530566 C2orf71A6NGG8 1288 aa8.79□□□□□ -1
POLB-216ENST00000530566 NFIBO00712 420 aa8.79□□□□□ -1
POLB-216ENST00000530566 GIPC1O14908 333 aa8.79□□□□□ -1
POLB-216ENST00000530566 GAS2O43903 313 aaKnown RBP8.79□□□□□ -1
POLB-216ENST00000530566 KALRNO60229 2985 aa8.79□□□□□ -1
POLB-216ENST00000530566 PPFIA4O75335 1185 aa8.79□□□□□ -1
POLB-216ENST00000530566 CHRNA1P02708 482 aa8.79□□□□□ -1
POLB-216ENST00000530566 PRB1P04280 392 aa8.79□□□□□ -1
POLB-216ENST00000530566 GNAT1P11488 350 aa8.79□□□□□ -1
POLB-216ENST00000530566 IBSPP21815 317 aaPredicted RBP8.79□□□□□ -1
POLB-216ENST00000530566 IRAK1P51617 712 aa8.79□□□□□ -1
POLB-216ENST00000530566 PLCB3Q01970 1234 aa8.79□□□□□ -1
POLB-216ENST00000530566 KRT17Q04695 432 aa8.79□□□□□ -1
POLB-216ENST00000530566 LPIN1Q14693 890 aa8.79□□□□□ -1
POLB-216ENST00000530566 PPP2R5DQ14738 602 aa8.79□□□□□ -1
POLB-216ENST00000530566 SF3A2Q15428 464 aaKnown RBP8.79□□□□□ -1
POLB-216ENST00000530566 LETM2Q2VYF4 491 aa8.79□□□□□ -1
POLB-216ENST00000530566 SLC30A10Q6XR72 485 aa8.79□□□□□ -1
POLB-216ENST00000530566 RNF207Q6ZRF8 634 aa8.79□□□□□ -1
POLB-216ENST00000530566 BEND4Q6ZU67 534 aa8.79□□□□□ -1
POLB-216ENST00000530566 GPR149Q86SP6 731 aa8.79□□□□□ -1
POLB-216ENST00000530566 CABP7Q86V35 215 aa8.79□□□□□ -1
POLB-216ENST00000530566 GMCL1P1Q8NEA9 526 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms