RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 ZFP42Q96MM3 310 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 NFKBIZQ9BYH8 718 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 PLEKHA4Q9H4M7 779 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 ANKEF1Q9NU02 776 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 EPS15L1Q9UBC2 864 aa16.61■□□□□ 0.25
CAPN1-219ENST00000530495 F8W810 466 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 NARSO43776 548 aaKnown RBP16.6■□□□□ 0.25
CAPN1-219ENST00000530495 RFPL2O75678 378 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 SPATA31D3P0C874 917 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 ARF4P18085 180 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-219ENST00000530495 GBP2P32456 591 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-219ENST00000530495 ARL2P36404 184 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 MBTD1Q05BQ5 628 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 LILRA6Q6PI73 481 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 SPATA31D4Q6ZUB0 917 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 RSAD2Q8WXG1 361 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 SMG7Q92540 1137 aaKnown RBP16.6■□□□□ 0.25
CAPN1-219ENST00000530495 ZNF707Q96C28 371 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-219ENST00000530495 EIF2AK1Q9BQI3 630 aaKnown RBP16.6■□□□□ 0.25
CAPN1-219ENST00000530495 NT5C3AQ9H0P0 336 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 FNIP2Q9P278 1114 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 PCDHA12Q9UN75 941 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 CLUHO75153 1309 aa16.6■□□□□ 0.25
CAPN1-219ENST00000530495 PTPRZ1P23471 2315 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-219ENST00000530495 PFKFB2O60825 505 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 DGAT1O75907 488 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 CFHP08603 1231 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 CAPSQ13938 189 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 ANGPT1Q15389 498 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 PALB2Q86YC2 1186 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 HACE1Q8IYU2 909 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 ASAP3Q8TDY4 903 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 MYADMQ96S97 322 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 APOL6Q9BWW8 343 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 GPR62Q9BZJ7 368 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 TRIM6Q9C030 488 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-219ENST00000530495 NXF3Q9H4D5 531 aaKnown RBP16.59■□□□□ 0.25
CAPN1-219ENST00000530495 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.59■□□□□ 0.25
CAPN1-219ENST00000530495 ZDHHC7Q9NXF8 308 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.59■□□□□ 0.25
CAPN1-219ENST00000530495 TPCN1Q9ULQ1 816 aa16.59■□□□□ 0.25
CAPN1-219ENST00000530495 DOCK8Q8NF50 2099 aa16.58■□□□□ 0.25
CAPN1-219ENST00000530495 A0A1B0GUA9 196 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 KRBA1A5PL33 1030 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 FAM205CA6NFA0 338 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 TGM5O43548 720 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 CTDNEP1O95476 244 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 MYBP10242 640 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 SRFP11831 508 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 XRCC6P12956 609 aaKnown RBP eCLIP16.58■□□□□ 0.24
CAPN1-219ENST00000530495 GLRA2P23416 452 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 AKAP5P24588 427 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 USP41Q3LFD5 358 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 FUT10Q6P4F1 479 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 SLC27A1Q6PCB7 646 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 WASF1Q92558 559 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 TNFRSF25Q93038 417 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 B3GALT6Q96L58 329 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 PRKD2Q9BZL6 878 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 ORC3Q9UBD5 711 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-219ENST00000530495 ADAM28Q9UKQ2 775 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 VPS13AQ96RL7 3174 aa16.58■□□□□ 0.24
CAPN1-219ENST00000530495 ZMYM2Q9UBW7 1377 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 STK25O00506 426 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 B4GALT5O43286 388 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 DTNBO60941 627 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 LAMP2P13473 410 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 RARRES1P49788 294 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 NR5A1Q13285 461 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 ADSSL1Q8N142 457 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 RIN2Q8WYP3 895 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-219ENST00000530495 TTC12Q9H892 705 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-219ENST00000530495 PIDD1Q9HB75 910 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 RIF1Q5UIP0 2472 aaKnown RBP16.57■□□□□ 0.24
CAPN1-219ENST00000530495 MYO15AQ9UKN7 3530 aa16.57■□□□□ 0.24
CAPN1-219ENST00000530495 SPTBN4Q9H254 2564 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 ANHXE9PGG2 379 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 TADA2AO75478 443 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 FDPSP14324 419 aaKnown RBP16.56■□□□□ 0.24
CAPN1-219ENST00000530495 KRT2P35908 639 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 CREMQ03060 361 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 GRIK3Q13003 919 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 CALCRLQ16602 461 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 POTEGQ6S5H5 508 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 KLK14Q9P0G3 267 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 FAM186AA6NE01 2351 aa16.56■□□□□ 0.24
CAPN1-219ENST00000530495 ZMYND10O75800 440 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 NPTXRO95502 500 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 RPL17P18621 184 aaKnown RBP16.55■□□□□ 0.24
CAPN1-219ENST00000530495 TXKP42681 527 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 PHLDB3Q6NSJ2 640 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 CDR2LQ86X02 465 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-219ENST00000530495 PIGOQ8TEQ8 1089 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 RABGGTAQ92696 567 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 MTMR9Q96QG7 549 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 SEMA4AQ9H3S1 761 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 BRMS1Q9HCU9 246 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 PARP2Q9UGN5 583 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 CA14Q9ULX7 337 aa16.55■□□□□ 0.24
CAPN1-219ENST00000530495 ZFP37Q9Y6Q3 630 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms