RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 C22orf23Q9BZE7 217 aa18.25■□□□□ 0.51
PACSIN3-206ENST00000530405 GPR62Q9BZJ7 368 aa18.25■□□□□ 0.51
PACSIN3-206ENST00000530405 DHX33Q9H6R0 707 aaKnown RBP18.25■□□□□ 0.51
PACSIN3-206ENST00000530405 CDH7Q9ULB5 785 aa18.25■□□□□ 0.51
PACSIN3-206ENST00000530405 DOCK6Q96HP0 2047 aa18.25■□□□□ 0.51
PACSIN3-206ENST00000530405 AXLP30530 894 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 NPEPPSP55786 919 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 FGD1P98174 961 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 CSTF1Q05048 431 aaKnown RBP18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 LAMTOR4Q0VGL1 99 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 SLC44A4Q53GD3 710 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 FUT10Q6P4F1 479 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 RASEFQ8IZ41 740 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 ETNPPLQ8TBG4 499 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 NELL1Q92832 810 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 CCDC51Q96ER9 411 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 B3GALT6Q96L58 329 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 RNF26Q9BY78 433 aaPredicted RBP18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 EPC1Q9H2F5 836 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 RNF39Q9H2S5 420 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 ZSCAN32Q9NX65 697 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 MIOSQ9NXC5 875 aa18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 CDV3Q9UKY7 258 aaKnown RBP18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 MTF2Q9Y483 593 aaPredicted RBP18.24■□□□□ 0.51
PACSIN3-206ENST00000530405 FAM170BA6NMN3 283 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 ASAP2O43150 1006 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 DKC1O60832 514 aaKnown RBP eCLIP18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 LILRB5O75023 590 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 ERLIN2O94905 339 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 TDP2O95551 362 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 HNRNPA1P09651 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 RFC5P40937 340 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 QARSP47897 775 aaKnown RBP18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 SCNN1GP51170 649 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 PFKPQ01813 784 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 UBXN2BQ14CS0 331 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 NOTUMQ6P988 496 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 GRASPQ7Z6J2 395 aaPredicted RBP18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 GLYCTKQ8IVS8 523 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 TMEM143Q96AN5 459 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 CEP170P1Q96L14 293 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 ZFP42Q96MM3 310 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 RTKNQ9BST9 563 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 EIF2AQ9BY44 585 aaKnown RBP18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 SH3GLB2Q9NR46 395 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 VPS54Q9P1Q0 977 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 ADAM28Q9UKQ2 775 aa18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 SMG5Q9UPR3 1016 aaKnown RBP18.23■□□□□ 0.51
PACSIN3-206ENST00000530405 COL4A3Q01955 1670 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 RPL17P18621 184 aaKnown RBP18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 NTRK3Q16288 839 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 MOXD1Q6UVY6 613 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 ZNF579Q8NAF0 562 aaKnown RBP18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 RNF149Q8NC42 400 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 TCP11Q8WWU5 503 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 FGF13Q92913 245 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 LTB4R2Q9NPC1 389 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 FBXW11Q9UKB1 542 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 GIT1Q9Y2X7 761 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 HES2Q9Y543 173 aa18.22■□□□□ 0.51
PACSIN3-206ENST00000530405 TSPAN1O60635 241 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 HOXA9P31269 272 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 NLRP5P59047 1200 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 NCBP1Q09161 790 aaKnown RBP18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 ZBTB41Q5SVQ8 909 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 FERMT3Q86UX7 667 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 GSTCDQ8NEC7 633 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 CLDN23Q96B33 292 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 NELL2Q99435 816 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 CSRNP2Q9H175 543 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 ZFHX4Q86UP3 3567 aa18.21■□□□□ 0.51
PACSIN3-206ENST00000530405 EML1O00423 815 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 TBC1D4O60343 1298 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 IFNAR1P17181 557 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 TGM1P22735 817 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 RPS9P46781 194 aaKnown RBP18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 NTHL1P78549 312 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 PPP2R5CQ13362 524 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 LIN9Q5TKA1 542 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 Q6ZUG5 572 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 HACE1Q8IYU2 909 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 BRF1Q92994 677 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 SLC26A6Q9BXS9 759 aa18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 FAM126AQ9BYI3 521 aaPredicted RBP18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 MAP1BP46821 2468 aaKnown RBP18.2■□□□□ 0.5
PACSIN3-206ENST00000530405 ZMYM2Q9UBW7 1377 aa18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 NCAM2O15394 837 aa18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 P4HBP07237 508 aaKnown RBP18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 PTENP60484 403 aa18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 GRIK3Q13003 919 aa18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 EMC2Q15006 297 aa18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 PPM1LQ5SGD2 360 aa18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 PRSS55Q6UWB4 352 aaPredicted RBP18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 IFNLR1Q8IU57 520 aaPredicted RBP18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 CPB2Q96IY4 423 aa18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 PHF20Q9BVI0 1012 aa18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 PRMT8Q9NR22 394 aaPredicted RBP18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 WRAP73Q9P2S5 460 aaPredicted RBP18.19■□□□□ 0.5
PACSIN3-206ENST00000530405 USP18Q9UMW8 372 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms