RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 HOXA11P31270 313 aaPredicted RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 TNFSF9P41273 254 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 MTIF2P46199 727 aaKnown RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 CDC42EP1Q00587 391 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 BFSP2Q13515 415 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 DCAF17Q5H9S7 520 aaPredicted RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 MPZL3Q6UWV2 235 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 ZPBP2Q6X784 338 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 TSHZ1Q6ZSZ6 1077 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 TMEM192Q8IY95 271 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 FAM186BQ8IYM0 893 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 CCDC155Q8N6L0 562 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 PRIMPOLQ96LW4 560 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 WNT8AQ9H1J5 351 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 THAP9Q9H5L6 903 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 AGPAT5Q9NUQ2 364 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 MAGEC2Q9UBF1 373 aaPredicted RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 AGO2Q9UKV8 859 aaKnown RBP11.63□□□□□ -0.55
SOX6-213ENST00000530378 PADI3Q9ULW8 664 aa11.63□□□□□ -0.55
SOX6-213ENST00000530378 ABLIM1O14639 778 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 CLTBP09497 229 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 TRIM49P0CI25 452 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 TRIM49CP0CI26 452 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 RPL13P26373 211 aaKnown RBP11.62□□□□□ -0.55
SOX6-213ENST00000530378 ABCD1P33897 745 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 KRT31Q15323 416 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 SNRNP35Q16560 246 aaKnown RBP11.62□□□□□ -0.55
SOX6-213ENST00000530378 FAM187BQ17R55 369 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 TCP11X2Q5H9J9 407 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 TWF2Q6IBS0 349 aaKnown RBP11.62□□□□□ -0.55
SOX6-213ENST00000530378 DEFB128Q7Z7B8 93 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 RPAINQ86UA6 219 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 XXYLT1Q8NBI6 393 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 VPS16Q9H269 839 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 RNF19AQ9NV58 838 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 FRMD4BQ9Y2L6 1034 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 HES2Q9Y543 173 aa11.62□□□□□ -0.55
SOX6-213ENST00000530378 A0A0B4J269 797 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 NBNO60934 754 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 SERPINC1P01008 464 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 EPB41P11171 864 aaKnown RBP11.61□□□□□ -0.55
SOX6-213ENST00000530378 PROZP22891 400 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 WNT7BP56706 349 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 FANCCQ00597 558 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 FAM26DQ5JW98 314 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 TCERG1LQ5VWI1 586 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 LMBRD2Q68DH5 695 aaPredicted RBP11.61□□□□□ -0.55
SOX6-213ENST00000530378 NOTUMQ6P988 496 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 UBE2Q1Q7Z7E8 422 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 ZC3H3Q8IXZ2 948 aaKnown RBP11.61□□□□□ -0.55
SOX6-213ENST00000530378 GPD1LQ8N335 351 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 CCDC127Q96BQ5 260 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 CEP63Q96MT8 703 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 SEZ6LQ9BYH1 1024 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 NXF3Q9H4D5 531 aaKnown RBP11.61□□□□□ -0.55
SOX6-213ENST00000530378 PTPRHQ9HD43 1115 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 DMAC2Q9NW81 257 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 IFNKQ9P0W0 207 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 TBX21Q9UL17 535 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 TNFSF13BQ9Y275 285 aa11.61□□□□□ -0.55
SOX6-213ENST00000530378 TRIM43BA6NCK2 446 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 N4BP3O15049 544 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 MGEA5O60502 916 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 GARTP22102 1010 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 SCP2P22307 547 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 ITGB8P26012 769 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 PSMC2P35998 433 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 SPAG1Q07617 926 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 NCBP1Q09161 790 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 FAM114A1Q8IWE2 563 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 C7orf61Q8IZ16 206 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 TMEM130Q8N3G9 435 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 RNF169Q8NCN4 708 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 PLEKHO2Q8TD55 490 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 KCNN1Q92952 543 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 TRIM43Q96BQ3 446 aaPredicted RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 TOX2Q96NM4 488 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 IFIH1Q9BYX4 1025 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 TRIM6Q9C030 488 aaPredicted RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 TMX1Q9H3N1 280 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 ERVK-5Q9HDB9 667 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 TOPORSQ9NS56 1045 aaPredicted RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 ARMCX3Q9UH62 379 aaPredicted RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 LAMA2P24043 3122 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 A0A1B0GUA9 196 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 PITPNM1O00562 1244 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 EXTL3O43909 919 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 FAM189A1O60320 539 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 CAND2O75155 1236 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 FGFR1OPO95684 399 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 RPLP2P05387 115 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 CXCL8P10145 99 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 DLATP10515 647 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 COPB1P53618 953 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 DLG4P78352 724 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 MCL1Q07820 350 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 GPNMBQ14956 572 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 TCTN1Q2MV58 587 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms