RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 IL1RL1Q01638 556 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 SP8Q8IXZ3 490 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 KCNB2Q92953 911 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 APOL6Q9BWW8 343 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 PPCSQ9HAB8 311 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 RAD51CO43502 376 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 CCDC124Q96CT7 223 aaKnown RBP16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 ISCUQ9H1K1 167 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 SMG5Q9UPR3 1016 aaKnown RBP16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 PITPNM2Q9BZ72 1349 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 ARHGAP10A1A4S6 786 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 STK4Q13043 487 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 SCARA5Q6ZMJ2 495 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 SYNE4Q8N205 404 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 MTRQ99707 1265 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 POLD4Q9HCU8 107 aa16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 NGRNQ9NPE2 291 aaKnown RBP16.39■□□□□ 0.21
PCDHA4-203ENST00000530339 EIF4E1BA6NMX2 242 aaKnown RBP16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 GNAT1P11488 350 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 SNRPFP62306 86 aaKnown RBP16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 LRRC31Q6UY01 552 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 PPM1NQ8N819 430 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 ATL2Q8NHH9 583 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 AGPAT1Q99943 283 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 TRIM51Q9BSJ1 452 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 SLC8A2Q9UPR5 921 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 STXBP3O00186 592 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 PHF2O75151 1096 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 SCP2P22307 547 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 NOP14P78316 857 aaKnown RBP16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 ADGRF4Q8IZF3 695 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 RNF139Q8WU17 664 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 SLC40A1Q9NP59 571 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 AXIN2Q9Y2T1 843 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 FRMPD1Q5SYB0 1578 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 USP17L10C9JJH3 530 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 QRICH1Q2TAL8 776 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 C7orf31Q8N865 590 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 OR2W6PQ8NHA6 318 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 SGSM3Q96HU1 749 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 FAM84BQ96KN1 310 aaPredicted RBP16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 GGT7Q9UJ14 662 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 CCT8L1PA6NM43 557 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 CSF1RP07333 972 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 PYGBP11216 843 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 TMEM270Q6UE05 265 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 ACAD11Q709F0 780 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 HPS3Q969F9 1004 aa16.38■□□□□ 0.21
PCDHA4-203ENST00000530339 AP5Z1O43299 807 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 TRIM49P0CI25 452 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 TRIM49CP0CI26 452 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 GALCP54803 685 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 OCRLQ01968 901 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 NAB2Q15742 525 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 ZNF699Q32M78 642 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 NUDCD3Q8IVD9 361 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 USP38Q8NB14 1042 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 SCG3Q8WXD2 468 aaKnown RBP16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 SMARCAL1Q9NZC9 954 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 TRIM33Q9UPN9 1127 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 ZFXP17010 805 aaPredicted RBP16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 PAPOLAP51003 745 aaKnown RBP16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 KLC1Q07866 573 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 TRAPPC11Q7Z392 1133 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 PASD1Q8IV76 773 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 PRPF38AQ8NAV1 312 aaKnown RBP16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 ATP6V1E2Q96A05 226 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 TRABDQ9H4I3 376 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 MAGED2Q9UNF1 606 aaPredicted RBP16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 PPP1R3GB7ZBB8 358 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 RAD17O75943 681 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 MMP10P09238 476 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 KITP10721 976 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 GPC3P51654 580 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 SF3B3Q15393 1217 aaKnown RBP16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 BTBD6Q96KE9 485 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 TRIM62Q9BVG3 475 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 WWP1Q9H0M0 922 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 MYO3AQ8NEV4 1616 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 ASAP2O43150 1006 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 UCHL3P15374 230 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 KCNV1Q6PIU1 500 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 KDM7AQ6ZMT4 941 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 ICA1LQ8NDH6 482 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 CELF1Q92879 486 aaKnown RBP16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 ERGIC2Q96RQ1 377 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 PTPRMP28827 1452 aa16.37■□□□□ 0.21
PCDHA4-203ENST00000530339 RTN2O75298 545 aa16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 ITIH2P19823 946 aa16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 CDO1Q16878 200 aa16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 TEDDM1Q5T9Z0 273 aa16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 SLC35G2Q8TBE7 412 aa16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 PSPC1Q8WXF1 523 aaKnown RBP16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 PGM1P36871 562 aa16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 EDRF1Q3B7T1 1238 aa16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 STK33Q9BYT3 514 aa16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 SNAP25P60880 206 aa16.36■□□□□ 0.21
PCDHA4-203ENST00000530339 HP1BP3Q5SSJ5 553 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms