RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 FEM1BQ9UK73 627 aa10.15□□□□□ -0.78
CCDC90B-217ENST00000530253 KLF18A0A0U1RQI7 1052 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 TMEM232C9JQI7 657 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 RXRAP19793 462 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 STAT2P52630 851 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 RCAN1P53805 252 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 SRSF3P84103 164 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 CAP1Q01518 475 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 COG2Q14746 738 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 ASPRV1Q53RT3 343 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 CATIPQ7Z7H3 387 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 FAM160B2Q86V87 743 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 RAB11FIP4Q86YS3 637 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 ZNF655Q8N720 491 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 MAP6Q96JE9 813 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 RHOVQ96L33 236 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 TMEM74Q96NL1 305 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 HDAC8Q9BY41 377 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 BTBD7Q9P203 1132 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 CPA4Q9UI42 421 aa10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 ZNF214Q9UL59 606 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-217ENST00000530253 ZNF536O15090 1300 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 ZSWIM8A7E2V4 1837 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 GOLGA8BA8MQT2 603 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 VWA5AO00534 786 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 ABLIM1O14639 778 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 CYTH3O43739 400 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 PLEKHA8P1O95397 391 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 PARP1P09874 1014 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 SYN1P17600 705 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 PDIA3P30101 505 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 SLC16A2P36021 539 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 GCLCP48506 637 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 NEK4P51957 841 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 RABEP1Q15276 862 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 FAM110CQ1W6H9 321 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 SNAP47Q5SQN1 464 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 SYDE2Q5VT97 1194 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 MICU3Q86XE3 530 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 PRPF38AQ8NAV1 312 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 SMCR8Q8TEV9 937 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 RSRP1Q9BUV0 290 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 UBA5Q9GZZ9 404 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 RANBP17Q9H2T7 1088 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 SLC38A10Q9HBR0 1119 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 RABGAP1Q9Y3P9 1069 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 SLC12A7Q9Y666 1083 aa10.13□□□□□ -0.79
CCDC90B-217ENST00000530253 KLRF2D3W0D1 207 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 RGS13O14921 159 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 ZBTB43O43298 467 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 FOXD2O60548 495 aaPredicted RBP10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 LARGE1O95461 756 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 CALM1P0DP23 149 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 CALM2P0DP24 149 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 CALM3P0DP25 149 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 CTGFP29279 349 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 GBP2P32456 591 aaPredicted RBP10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 ST3GAL1Q11201 340 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 TMEM132BQ14DG7 1078 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 CEP128Q6ZU80 1094 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 TMTC3Q6ZXV5 915 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 REC114Q7Z4M0 266 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 CTU1Q7Z7A3 348 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 CCDC144CPQ8IYA2 1237 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 ANKRD13CQ8N6S4 541 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 MB21D1Q8N884 522 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 FANCBQ8NB91 859 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 CHURC1Q8WUH1 139 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 NUP133Q8WUM0 1156 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 VWCEQ96DN2 955 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 MTMR8Q96EF0 704 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 SPZ1Q9BXG8 430 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 HOXC10Q9NYD6 342 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 RTEL1Q9NZ71 1219 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 MBD1Q9UIS9 605 aaPredicted RBP10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 TPCN1Q9ULQ1 816 aa10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 POLR3KQ9Y2Y1 108 aaPredicted RBP10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 COL11A1P12107 1806 aaPredicted RBP10.12□□□□□ -0.79
CCDC90B-217ENST00000530253 GOLGA8AA7E2F4 631 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 ATP2A1O14983 1001 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 FKTNO75072 461 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 ENDOUP21128 410 aaKnown RBP10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 METAP2P50579 478 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 SNAP25P60880 206 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 SSPNQ14714 243 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 ADGRF4Q8IZF3 695 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 SRBD1Q8N5C6 995 aaKnown RBP10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 ZNF274Q96GC6 653 aaPredicted RBP10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 PAGR1Q9BTK6 254 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 MOV10L1Q9BXT6 1211 aaKnown RBP10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 PORCNQ9H237 461 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 RIOX1Q9H6W3 641 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 JMJD4Q9H9V9 463 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 TCFL5Q9UL49 500 aa10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 ISY1Q9ULR0 285 aaKnown RBP10.11□□□□□ -0.79
CCDC90B-217ENST00000530253 NOTOA8MTQ0 251 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 PFKFB2O60825 505 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms