RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, human

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSRP1-213	ENST00000530120	SSB	P05455	408 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	SRF	P11831	508 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	PTEN	P60484	403 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	ORC2	Q13416	577 aa	Predicted RBP	13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	PTPN14	Q15678	1187 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	CALCRL	Q16602	461 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	XKR9	Q5GH70	373 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	TMEM173	Q86WV6	379 aa	Predicted RBP	13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	OXER1	Q8TDS5	423 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	RSAD2	Q8WXG1	361 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	LPP	Q93052	612 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	SECISBP2L	Q93073	1101 aa	Known RBP	13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	TMEM143	Q96AN5	459 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	DYDC2	Q96IM9	177 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	FAM193B	Q96PV7	902 aa	Predicted RBP	13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	GBP3	Q9H0R5	595 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	DPP7	Q9UHL4	492 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	PCDHA12	Q9UN75	941 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	DOCK8	Q8NF50	2099 aa		13.32	□□□□□ -0.28
CSRP1-213	ENST00000530120	NR1I2	O75469	434 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	C1R	P00736	705 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	SRGAP2C	P0DJJ0	459 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	HOXA11	P31270	313 aa	Predicted RBP	13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	SLC11A1	P49279	550 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	CLCN4	P51793	760 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	NR5A1	Q13285	461 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	KIAA0319	Q5VV43	1072 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	AGMO	Q6ZNB7	445 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	GPR161	Q8N6U8	529 aa	Known RBP	13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	FEZF2	Q8TBJ5	459 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	NXPE3	Q969Y0	559 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	TBC1D32	Q96NH3	1257 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	KLHL5	Q96PQ7	755 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	HSD17B14	Q9BPX1	270 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	ARHGEF3	Q9NR81	526 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	MRPL17	Q9NRX2	175 aa	Known RBP	13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	RGL1	Q9NZL6	768 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	GPR179	Q6PRD1	2367 aa		13.31	□□□□□ -0.28
CSRP1-213	ENST00000530120	CHD8	Q9HCK8	2581 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	MEIS3P2	A8K0S8	358 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	SLITRK3	O94933	977 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	ALDH2	P05091	517 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	XRCC6	P12956	609 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	ITGA4	P13612	1032 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	CYP4A11	Q02928	519 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	CTTN	Q14247	550 aa	Known RBP	13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	UBXN11	Q5T124	520 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	PHLDB3	Q6NSJ2	640 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	CYP26C1	Q6V0L0	522 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	TPH2	Q8IWU9	490 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	DIS3L2	Q8IYB7	885 aa	Known RBP	13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	GPR65	Q8IYL9	337 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	SLC44A3	Q8N4M1	653 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	ZNF579	Q8NAF0	562 aa	Known RBP	13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	NSUN7	Q8NE18	718 aa	Known RBP	13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	CMAS	Q8NFW8	434 aa	Predicted RBP	13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	GPR152	Q8TDT2	470 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	RHOBTB2	Q9BYZ6	727 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	TTC12	Q9H892	705 aa	Predicted RBP	13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	MINDY3	Q9H8M7	445 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	MAN1C1	Q9NR34	630 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	DNAJB4	Q9UDY4	337 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	CDV3	Q9UKY7	258 aa	Known RBP	13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	CLUH	O75153	1309 aa		13.3	□□□□□ -0.28
CSRP1-213	ENST00000530120	TSPAN1	O60635	241 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	SOD2	P04179	222 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	UROD	P06132	367 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	ADH1A	P07327	375 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	CNP	P09543	421 aa	Known RBP	13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	FDPS	P14324	419 aa	Known RBP	13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	SAFB	Q15424	915 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	ME3	Q16798	604 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	ST3GAL2	Q16842	350 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	LONRF3	Q496Y0	759 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	EARS2	Q5JPH6	523 aa	Known RBP	13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	VARS2	Q5ST30	1063 aa	Known RBP	13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	DCLRE1A	Q6PJP8	1040 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	MCPH1	Q8NEM0	835 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	BORCS6	Q96GS4	357 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	PRIMPOL	Q96LW4	560 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	HERC2P3	Q9BVR0	1158 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	TRIM6	Q9C030	488 aa	Predicted RBP	13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	CSRNP2	Q9H175	543 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	PIDD1	Q9HB75	910 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	WDR6	Q9NNW5	1121 aa	Known RBP	13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	XPNPEP1	Q9NQW7	623 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	GJB4	Q9NTQ9	266 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	EPS15L1	Q9UBC2	864 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	FAN1	Q9Y2M0	1017 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	GIT1	Q9Y2X7	761 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	IPP	Q9Y573	584 aa		13.29	□□□□□ -0.28
CSRP1-213	ENST00000530120	CCDC195	A0A1B0GUA6	201 aa		13.28	□□□□□ -0.28
CSRP1-213	ENST00000530120	ARL5C	A6NH57	179 aa		13.28	□□□□□ -0.28
CSRP1-213	ENST00000530120	INO80B-WBP1	J3KQ70	363 aa		13.28	□□□□□ -0.28
CSRP1-213	ENST00000530120	C2CD2L	O14523	706 aa		13.28	□□□□□ -0.28
CSRP1-213	ENST00000530120	SPTLC1	O15269	473 aa		13.28	□□□□□ -0.28
CSRP1-213	ENST00000530120	N4BP1	O75113	896 aa	Known RBP	13.28	□□□□□ -0.28
CSRP1-213	ENST00000530120	ARL2	P36404	184 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms