RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 COLEC11Q9BWP8 271 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 BCO2Q9BYV7 579 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 NT5C3AQ9H0P0 336 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 RXFP1Q9HBX9 757 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 SLC2A4RGQ9NR83 387 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.06□□□□□ -0.8
VPS11-203ENST00000529545 ZDHHC7Q9NXF8 308 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 COL4A3BPQ9Y5P4 624 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 FANCMQ8IYD8 2048 aa10.06□□□□□ -0.8
VPS11-203ENST00000529545 TMEM150BA6NC51 233 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 ADAMTS3O15072 1205 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 SPTLC1O15269 473 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 LAMTOR5O43504 91 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 PSMD10O75832 226 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 ERLIN2O94905 339 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 SRGAP2CP0DJJ0 459 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 NCLP19338 710 aaKnown RBP10.05□□□□□ -0.8
VPS11-203ENST00000529545 FSHRP23945 695 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 PSMC5P62195 406 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 DSG1Q02413 1049 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 CREMQ03060 361 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 HTR4Q13639 388 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 C6orf132Q5T0Z8 1188 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 TAS1R1Q7RTX1 841 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 HACE1Q8IYU2 909 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 ATRIPQ8WXE1 791 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 PSPC1Q8WXF1 523 aaKnown RBP10.05□□□□□ -0.8
VPS11-203ENST00000529545 ZNF707Q96C28 371 aaPredicted RBP10.05□□□□□ -0.8
VPS11-203ENST00000529545 CEP89Q96ST8 783 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 PRKD2Q9BZL6 878 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 FOXQ1Q9C009 403 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 IFT122Q9HBG6 1241 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 SPATA6Q9NWH7 488 aaPredicted RBP10.05□□□□□ -0.8
VPS11-203ENST00000529545 MARCH5Q9NX47 278 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 DLGAP2Q9P1A6 1054 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 RABGEF1Q9UJ41 708 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 FBXO4Q9UKT5 387 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 NUMBLQ9Y6R0 609 aa10.05□□□□□ -0.8
VPS11-203ENST00000529545 MTCL1Q9Y4B5 1905 aaKnown RBP10.05□□□□□ -0.8
VPS11-203ENST00000529545 DCHS1Q96JQ0 3298 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 MIA3Q5JRA6 1907 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 ANHXE9PGG2 379 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 ASAP2O43150 1006 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 STBD1O95210 358 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 AXLP30530 894 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 AFF1P51825 1210 aaKnown RBP10.04□□□□□ -0.8
VPS11-203ENST00000529545 NLRP5P59047 1200 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 STARD6P59095 220 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 PRKCQQ04759 706 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 PCBP1Q15365 356 aaKnown RBP eCLIP10.04□□□□□ -0.8
VPS11-203ENST00000529545 USP41Q3LFD5 358 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 ZNF528Q3MIS6 628 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 Q4G0T1 1027 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 ANO5Q75V66 913 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 MTSS1LQ765P7 747 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 COLGALT2Q8IYK4 626 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 GPR65Q8IYL9 337 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 SUMF1Q8NBK3 374 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 TBCKQ8TEA7 893 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 TCP11Q8WWU5 503 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 PRPF31Q8WWY3 499 aaKnown RBP10.04□□□□□ -0.8
VPS11-203ENST00000529545 GJA10Q969M2 543 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 CEP170P1Q96L14 293 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 GAD1Q99259 594 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
VPS11-203ENST00000529545 SH3GLB2Q9NR46 395 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 FNIP2Q9P278 1114 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 PPME1Q9Y570 386 aa10.04□□□□□ -0.8
VPS11-203ENST00000529545 TDRD15B5MCY1 1934 aaKnown RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 DOCK8Q8NF50 2099 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 KANSL1LA0AUZ9 987 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 ARL5CA6NH57 179 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 PRR5-ARHGAP8B1AHC4 643 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 NCAM2O15394 837 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 TGM5O43548 720 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 ZMYND10O75800 440 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 HOXA11P31270 313 aaPredicted RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 MLH1P40692 756 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 RFC5P40937 340 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 MAGEA9P43362 315 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 QARSP47897 775 aaKnown RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 GPC5P78333 572 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 ARHGAP8P85298 464 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 PLCB2Q00722 1185 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 PFKPQ01813 784 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 LMNB2Q03252 620 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 CSTF1Q05048 431 aaKnown RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 SNW1Q13573 536 aaKnown RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 UBXN2BQ14CS0 331 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 ADCK5Q3MIX3 580 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 TSGA10IPQ3SY00 556 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 UBXN11Q5T124 520 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 LIN9Q5TKA1 542 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 PLA2G4FQ68DD2 849 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 NOTUMQ6P988 496 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 OTUD6AQ7L8S5 288 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 GLYCTKQ8IVS8 523 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 RNF168Q8IYW5 571 aaPredicted RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 RNF149Q8NC42 400 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 TMEM143Q96AN5 459 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms